Analysis of interatomic Contacts of Structural Units in PDB entry:
9X5I


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9X5I entry

There are 3 chains in PDB entry 9X5I (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 211GLN 589
B
 THR 211GLN 589
C
 GLU 210GLU 591
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 48 helices in PDB entry 9X5I. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
211 228Right-handed alpha
Helix 2
AA2
A
230 247Right-handed alpha
Helix 3
AA3
A
249 269Right-handed alpha
Helix 4
AA4
A
277 291Right-handed alpha
Helix 5
AA5
A
292 309Right-handed alpha
Helix 6
AA6
A
327 337Right-handed alpha
Helix 7
AA7
A
359 376Right-handed alpha
Helix 8
AA8
A
388 392Right-handed 310
Helix 9
AA9
A
393 398Right-handed 310
Helix 10
AB1
A
412 419Right-handed 310
Helix 11
AB2
A
421 434Right-handed alpha
Helix 12
AB3
A
451 472Right-handed alpha
Helix 13
AB4
A
492 511Right-handed alpha
Helix 14
AB5
A
512 516Right-handed 310
Helix 15
AB6
A
522 533Right-handed alpha
Helix 16
AB7
A
541 555Right-handed alpha
Helix 17
AB8
B
212 228Right-handed alpha
Helix 18
AB9
B
230 248Right-handed alpha
Helix 19
AC1
B
250 268Right-handed alpha
Helix 20
AC2
B
277 291Right-handed alpha
Helix 21
AC3
B
292 310Right-handed alpha
Helix 22
AC4
B
327 337Right-handed alpha
Helix 23
AC5
B
359 376Right-handed alpha
Helix 24
AC6
B
388 392Right-handed 310
Helix 25
AC7
B
393 398Right-handed 310
Helix 26
AC8
B
412 419Right-handed 310
Helix 27
AC9
B
421 434Right-handed alpha
Helix 28
AD1
B
451 471Right-handed alpha
Helix 29
AD2
B
495 511Right-handed alpha
Helix 30
AD3
B
512 516Right-handed 310
Helix 31
AD4
B
522 533Right-handed alpha
Helix 32
AD5
B
541 555Right-handed alpha
Helix 33
AD6
C
211 228Right-handed alpha
Helix 34
AD7
C
230 247Right-handed alpha
Helix 35
AD8
C
249 269Right-handed alpha
Helix 36
AD9
C
277 291Right-handed alpha
Helix 37
AE1
C
292 310Right-handed alpha
Helix 38
AE2
C
327 337Right-handed alpha
Helix 39
AE3
C
359 376Right-handed alpha
Helix 40
AE4
C
388 392Right-handed 310
Helix 41
AE5
C
393 398Right-handed 310
Helix 42
AE6
C
412 419Right-handed 310
Helix 43
AE7
C
421 434Right-handed alpha
Helix 44
AE8
C
451 471Right-handed alpha
Helix 45
AE9
C
495 511Right-handed alpha
Helix 46
AF1
C
512 516Right-handed 310
Helix 47
AF2
C
522 533Right-handed alpha
Helix 48
AF3
C
541 555Right-handed alpha
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There are 6 sheets in PDB entry 9X5I. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
379 385first strand
Strand 2
A
344 351parallel
Strand 3
A
314 319parallel
Strand 4
A
404 410parallel
Strand 5
A
437 443parallel
Strand 6
A
577 586anti-parallel
Strand 7
A
536 537anti-parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
379 385first strand
Strand 2
A
344 351parallel
Strand 3
A
314 319parallel
Strand 4
A
404 410parallel
Strand 5
A
437 443parallel
Strand 6
A
577 586anti-parallel
Strand 7
A
569 574anti-parallel
Strand 8
A
561 566anti-parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
379 385first strand
Strand 2
B
344 351parallel
Strand 3
B
314 319parallel
Strand 4
B
404 410parallel
Strand 5
B
437 443parallel
Strand 6
B
577 586anti-parallel
Strand 7
B
536 538anti-parallel
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There are 8 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
379 385first strand
Strand 2
B
344 351parallel
Strand 3
B
314 319parallel
Strand 4
B
404 410parallel
Strand 5
B
437 443parallel
Strand 6
B
577 586anti-parallel
Strand 7
B
569 574anti-parallel
Strand 8
B
561 566anti-parallel
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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
379 385first strand
Strand 2
C
344 351parallel
Strand 3
C
314 319parallel
Strand 4
C
404 410parallel
Strand 5
C
437 443parallel
Strand 6
C
577 586anti-parallel
Strand 7
C
536 537anti-parallel
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There are 8 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
379 385first strand
Strand 2
C
344 351parallel
Strand 3
C
314 319parallel
Strand 4
C
404 410parallel
Strand 5
C
437 443parallel
Strand 6
C
577 586anti-parallel
Strand 7
C
569 574anti-parallel
Strand 8
C
561 566anti-parallel
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