Analysis of interatomic Contacts of Structural Units in PDB entry:
9X5R


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9X5R entry

There are 2 chains in PDB entry 9X5R (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PHE 3ILE 1237
B
 ASN 137PRO 181
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 60 helices in PDB entry 9X5R. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
33 42Right-handed alpha
Helix 2
AA2
A
45 54Right-handed alpha
Helix 3
AA3
A
65 70Right-handed alpha
Helix 4
AA4
A
81 99Right-handed alpha
Helix 5
AA5
A
101 116Right-handed alpha
Helix 6
AA6
A
118 139Right-handed alpha
Helix 7
AA7
A
176 202Right-handed alpha
Helix 8
AA8
A
208 221Right-handed alpha
Helix 9
AA9
A
225 248Right-handed alpha
Helix 10
AB1
A
255 259Right-handed 310
Helix 11
AB2
A
261 266Right-handed alpha
Helix 12
AB3
A
266 280Right-handed alpha
Helix 13
AB4
A
280 290Right-handed alpha
Helix 14
AB5
A
300 312Right-handed alpha
Helix 15
AB6
A
318 345Right-handed alpha
Helix 16
AB7
A
358 368Right-handed alpha
Helix 17
AB8
A
371 377Right-handed alpha
Helix 18
AB9
A
378 382Right-handed 310
Helix 19
AC1
A
397 402Right-handed alpha
Helix 20
AC2
A
410 415Right-handed alpha
Helix 21
AC3
A
419 428Right-handed alpha
Helix 22
AC4
A
441 450Right-handed alpha
Helix 23
AC5
A
454 465Right-handed alpha
Helix 24
AC6
A
468 471Right-handed 310
Helix 25
AC7
A
494 512Right-handed alpha
Helix 26
AC8
A
517 523Right-handed alpha
Helix 27
AC9
A
524 542Right-handed alpha
Helix 28
AD1
A
553 558Right-handed alpha
Helix 29
AD2
A
559 575Right-handed alpha
Helix 30
AD3
A
578 586Right-handed alpha
Helix 31
AD4
A
587 589Right-handed 310
Helix 32
AD5
A
627 646Right-handed alpha
Helix 33
AD6
A
670 690Right-handed alpha
Helix 34
AD7
A
720 726Right-handed alpha
Helix 35
AD8
A
738 756Right-handed alpha
Helix 36
AD9
A
759 779Right-handed alpha
Helix 37
AE1
A
780 785Right-handed alpha
Helix 38
AE2
A
786 795Right-handed alpha
Helix 39
AE3
A
797 801Right-handed 310
Helix 40
AE4
A
819 835Right-handed alpha
Helix 41
AE5
A
838 847Right-handed alpha
Helix 42
AE6
A
855 862Right-handed alpha
Helix 43
AE7
A
877 889Right-handed alpha
Helix 44
AE8
A
893 901Right-handed alpha
Helix 45
AE9
A
902 915Right-handed alpha
Helix 46
AF1
A
921 932Right-handed alpha
Helix 47
AF2
A
933 945Right-handed alpha
Helix 48
AF3
A
947 957Right-handed alpha
Helix 49
AF4
A
959 979Right-handed alpha
Helix 50
AF5
A
986 990Right-handed 310
Helix 51
AF6
A
993 1007Right-handed alpha
Helix 52
AF7
A
1017 1021Right-handed alpha
Helix 53
AF8
A
1031 1037Right-handed alpha
Helix 54
AF9
A
1049 1053Right-handed 310
Helix 55
AG1
A
1082 1100Right-handed alpha
Helix 56
AG2
A
1104 1119Right-handed alpha
Helix 57
AG3
A
1148 1156Right-handed alpha
Helix 58
AG4
A
1178 1195Right-handed alpha
Helix 59
AG5
A
1210 1214Right-handed 310
Helix 60
AG6
B
138 167Right-handed alpha
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There are 7 sheets in PDB entry 9X5R. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
58 60first strand
Strand 2
A
170 175parallel
Strand 3
A
162 167anti-parallel
Strand 4
A
154 159anti-parallel
Strand 5
A
145 151anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
351 353first strand
Strand 2
A
384 386anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
489 492first strand
Strand 2
A
473 478anti-parallel
Strand 3
A
591 594parallel
Strand 4
A
615 617anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
650 654first strand
Strand 2
A
658 664anti-parallel
Strand 3
A
544 550anti-parallel
Strand 4
A
699 701anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
603 604first strand
Strand 2
A
607 608anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
704 706first strand
Strand 2
A
711 713anti-parallel
Strand 3
A
716 717anti-parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1022 1026first strand
Strand 2
A
1204 1208anti-parallel
Strand 3
A
1038 1041anti-parallel
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