Analysis of interatomic Contacts of Structural Units in PDB entry:
9X5Z

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9X5Z entry

There are 8 chains in PDB entry 9X5Z (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASP 1	PRO 339
K	GLY 366	ALA 499
B	ASP 1	PRO 339
M	GLY 366	ALA 499
C	ASP 1	PRO 339
N	GLY 366	ALA 499
H	GLU 1	SER 128
L	GLU 1	LYS 127

There are 30 helices in PDB entry 9X5Z. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	61	68	Right-handed alpha
Helix 2	AA2	A	98	102	Right-handed 310
Helix 3	AA3	A	103	105	Right-handed 310
Helix 4	AA4	A	106	113	Right-handed alpha
Helix 5	AA5	A	126	130	Right-handed 310
Helix 6	AA6	A	196	205	Right-handed alpha
Helix 7	AA7	K	385	402	Right-handed alpha
Helix 8	AA8	K	420	455	Right-handed alpha
Helix 9	AA9	K	457	469	Right-handed alpha
Helix 10	AB1	B	61	68	Right-handed alpha
Helix 11	AB2	B	98	102	Right-handed 310
Helix 12	AB3	B	103	105	Right-handed 310
Helix 13	AB4	B	106	113	Right-handed alpha
Helix 14	AB5	B	126	130	Right-handed 310
Helix 15	AB6	B	196	205	Right-handed alpha
Helix 16	AB7	M	385	403	Right-handed alpha
Helix 17	AB8	M	420	455	Right-handed alpha
Helix 18	AB9	M	458	473	Right-handed alpha
Helix 19	AC1	C	61	68	Right-handed alpha
Helix 20	AC2	C	98	102	Right-handed 310
Helix 21	AC3	C	103	105	Right-handed 310
Helix 22	AC4	C	106	113	Right-handed alpha
Helix 23	AC5	C	126	130	Right-handed 310
Helix 24	AC6	C	196	205	Right-handed alpha
Helix 25	AC7	N	387	403	Right-handed alpha
Helix 26	AC8	N	420	455	Right-handed alpha
Helix 27	AC9	N	456	473	Right-handed alpha
Helix 28	AD1	N	491	495	Right-handed 310
Helix 29	AD2	H	29	37	Right-handed 310
Helix 30	AD3	L	95	99	Right-handed 310

There are 37 sheets in PDB entry 9X5Z. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	14	17	first strand
Strand 2	A	23	26	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	29	31	first strand
Strand 2	A	329	331	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	33	34	first strand
Strand 2	A	308	309	parallel
Strand 3	A	322	323	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	43	44	first strand
Strand 2	A	291	292	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	49	50	first strand
Strand 2	A	81	84	parallel
Strand 3	A	280	283	parallel

Back to list of sheets
Back to top of page

There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	116	119	first strand
Strand 2	A	273	276	anti-parallel
Strand 3	A	185	194	anti-parallel
Strand 4	A	266	269	anti-parallel
Strand 5	A	156	161	anti-parallel
Strand 6	A	135	138	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	116	119	first strand
Strand 2	A	273	276	anti-parallel
Strand 3	A	185	194	anti-parallel
Strand 4	A	244	252	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	172	176	first strand
Strand 2	A	258	262	anti-parallel
Strand 3	A	211	216	anti-parallel
Strand 4	A	219	224	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	300	302	first strand
Strand 2	A	294	296	anti-parallel
Strand 3	A	316	318	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	369	371	first strand
Strand 2	K	380	382	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	6	7	first strand
Strand 2	M	368	370	anti-parallel
Strand 3	M	381	382	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	14	17	first strand
Strand 2	B	23	26	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	29	31	first strand
Strand 2	B	329	331	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	33	34	first strand
Strand 2	B	308	309	parallel
Strand 3	B	322	323	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	43	44	first strand
Strand 2	B	291	292	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	49	50	first strand
Strand 2	B	81	84	parallel
Strand 3	B	280	283	parallel

Back to list of sheets
Back to top of page

There are 6 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	116	119	first strand
Strand 2	B	273	276	anti-parallel
Strand 3	B	185	194	anti-parallel
Strand 4	B	266	269	anti-parallel
Strand 5	B	156	161	anti-parallel
Strand 6	B	135	138	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	116	119	first strand
Strand 2	B	273	276	anti-parallel
Strand 3	B	185	194	anti-parallel
Strand 4	B	244	252	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	172	176	first strand
Strand 2	B	258	262	anti-parallel
Strand 3	B	211	216	anti-parallel
Strand 4	B	219	224	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	300	302	first strand
Strand 2	B	294	296	anti-parallel
Strand 3	B	316	318	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	6	7	first strand
Strand 2	N	368	369	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	14	17	first strand
Strand 2	C	23	26	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	29	31	first strand
Strand 2	C	329	331	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	43	44	first strand
Strand 2	C	291	292	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	49	50	first strand
Strand 2	C	81	83	parallel
Strand 3	C	280	282	parallel

Back to list of sheets
Back to top of page

There are 6 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	116	119	first strand
Strand 2	C	273	276	anti-parallel
Strand 3	C	185	194	anti-parallel
Strand 4	C	266	269	anti-parallel
Strand 5	C	156	161	anti-parallel
Strand 6	C	135	138	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	116	119	first strand
Strand 2	C	273	276	anti-parallel
Strand 3	C	185	194	anti-parallel
Strand 4	C	244	252	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	172	176	first strand
Strand 2	C	258	262	anti-parallel
Strand 3	C	211	216	anti-parallel
Strand 4	C	219	224	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	300	302	first strand
Strand 2	C	294	296	anti-parallel
Strand 3	C	316	318	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	308	309	first strand
Strand 2	C	322	323	parallel

Back to list of sheets
Back to top of page

There are 4 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	3	7	first strand
Strand 2	H	19	26	anti-parallel
Strand 3	H	86	91	anti-parallel
Strand 4	H	76	81	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	12	13	first strand
Strand 2	H	122	126	parallel
Strand 3	H	100	107	anti-parallel
Strand 4	H	39	44	anti-parallel
Strand 5	H	50	56	anti-parallel
Strand 6	H	65	67	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	12	13	first strand
Strand 2	H	122	126	parallel
Strand 3	H	100	107	anti-parallel
Strand 4	H	115	118	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	5	6	first strand
Strand 2	L	19	24	anti-parallel
Strand 3	L	86	91	anti-parallel
Strand 4	L	76	77	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	5	6	first strand
Strand 2	L	19	24	anti-parallel
Strand 3	L	86	91	anti-parallel
Strand 4	L	80	83	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	66	67	first strand
Strand 2	L	51	55	anti-parallel
Strand 3	L	39	44	anti-parallel
Strand 4	L	101	106	anti-parallel
Strand 5	L	117	118	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	66	67	first strand
Strand 2	L	51	55	anti-parallel
Strand 3	L	39	44	anti-parallel
Strand 4	L	101	106	anti-parallel
Strand 5	L	122	123	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9X5Z

Analysis of interatomic Contacts of Structural Units in PDB entry:
9X5Z