Analysis of interatomic Contacts of Structural Units in PDB entry:
9X6F

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9X6F entry

There are 4 chains in PDB entry 9X6F (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	HIS 0	GLU 350
B	HIS 0	GLY 349
C	HIS 0	GLU 350
D	HIS 0	GLU 251

There are 67 helices in PDB entry 9X6F. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	15	27	Right-handed alpha
Helix 2	AA2	A	39	44	Right-handed alpha
Helix 3	AA3	A	47	54	Right-handed alpha
Helix 4	AA4	A	55	67	Right-handed alpha
Helix 5	AA5	A	89	102	Right-handed alpha
Helix 6	AA6	A	118	124	Right-handed alpha
Helix 7	AA7	A	142	149	Right-handed alpha
Helix 8	AA8	A	158	166	Right-handed alpha
Helix 9	AA9	A	178	190	Right-handed alpha
Helix 10	AB1	A	197	206	Right-handed alpha
Helix 11	AB2	A	215	236	Right-handed alpha
Helix 12	AB3	A	246	258	Right-handed alpha
Helix 13	AB4	A	262	271	Right-handed alpha
Helix 14	AB5	A	301	311	Right-handed alpha
Helix 15	AB6	A	312	315	Right-handed 310
Helix 16	AB7	A	327	347	Right-handed alpha
Helix 17	AB8	B	15	28	Right-handed alpha
Helix 18	AB9	B	39	44	Right-handed alpha
Helix 19	AC1	B	47	54	Right-handed alpha
Helix 20	AC2	B	55	67	Right-handed alpha
Helix 21	AC3	B	89	102	Right-handed alpha
Helix 22	AC4	B	118	124	Right-handed alpha
Helix 23	AC5	B	142	149	Right-handed alpha
Helix 24	AC6	B	158	166	Right-handed alpha
Helix 25	AC7	B	178	191	Right-handed alpha
Helix 26	AC8	B	197	206	Right-handed alpha
Helix 27	AC9	B	210	214	Right-handed 310
Helix 28	AD1	B	215	236	Right-handed alpha
Helix 29	AD2	B	246	258	Right-handed alpha
Helix 30	AD3	B	262	271	Right-handed alpha
Helix 31	AD4	B	301	311	Right-handed alpha
Helix 32	AD5	B	312	315	Right-handed 310
Helix 33	AD6	B	327	347	Right-handed alpha
Helix 34	AD7	C	15	28	Right-handed alpha
Helix 35	AD8	C	39	44	Right-handed alpha
Helix 36	AD9	C	47	54	Right-handed alpha
Helix 37	AE1	C	55	67	Right-handed alpha
Helix 38	AE2	C	89	102	Right-handed alpha
Helix 39	AE3	C	118	124	Right-handed alpha
Helix 40	AE4	C	142	149	Right-handed alpha
Helix 41	AE5	C	158	166	Right-handed alpha
Helix 42	AE6	C	178	191	Right-handed alpha
Helix 43	AE7	C	197	202	Right-handed alpha
Helix 44	AE8	C	210	214	Right-handed 310
Helix 45	AE9	C	215	236	Right-handed alpha
Helix 46	AF1	C	246	258	Right-handed alpha
Helix 47	AF2	C	262	271	Right-handed alpha
Helix 48	AF3	C	299	311	Right-handed alpha
Helix 49	AF4	C	312	315	Right-handed 310
Helix 50	AF5	C	327	347	Right-handed alpha
Helix 51	AF6	D	15	27	Right-handed alpha
Helix 52	AF7	D	39	44	Right-handed alpha
Helix 53	AF8	D	47	54	Right-handed alpha
Helix 54	AF9	D	55	67	Right-handed alpha
Helix 55	AG1	D	89	102	Right-handed alpha
Helix 56	AG2	D	118	124	Right-handed alpha
Helix 57	AG3	D	142	149	Right-handed alpha
Helix 58	AG4	D	158	166	Right-handed alpha
Helix 59	AG5	D	178	191	Right-handed alpha
Helix 60	AG6	D	197	202	Right-handed alpha
Helix 61	AG7	D	210	214	Right-handed 310
Helix 62	AG8	D	215	236	Right-handed alpha
Helix 63	AG9	D	246	258	Right-handed alpha
Helix 64	AH1	D	262	271	Right-handed alpha
Helix 65	AH2	D	301	311	Right-handed alpha
Helix 66	AH3	D	312	315	Right-handed 310
Helix 67	AH4	D	327	345	Right-handed alpha

There are 10 sheets in PDB entry 9X6F. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2	9	first strand
Strand 2	A	29	38	parallel
Strand 3	A	73	79	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	108	112	first strand
Strand 2	A	128	132	parallel

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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	194	195	first strand
Strand 2	A	240	244	parallel
Strand 3	A	167	173	parallel
Strand 4	A	276	280	parallel
Strand 5	A	320	323	parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	2	9	first strand
Strand 2	B	29	38	parallel
Strand 3	B	73	79	parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	108	112	first strand
Strand 2	B	128	132	parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	194	195	first strand
Strand 2	B	240	244	parallel
Strand 3	B	167	172	parallel
Strand 4	B	276	280	parallel
Strand 5	B	320	323	parallel

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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	73	79	first strand
Strand 2	C	29	38	parallel
Strand 3	C	2	9	parallel
Strand 4	C	108	112	parallel
Strand 5	C	128	132	parallel

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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	194	195	first strand
Strand 2	C	240	244	parallel
Strand 3	C	167	172	parallel
Strand 4	C	276	280	parallel
Strand 5	C	320	323	parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	73	79	first strand
Strand 2	D	29	38	parallel
Strand 3	D	2	9	parallel
Strand 4	D	107	111	parallel
Strand 5	D	128	131	parallel

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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	194	195	first strand
Strand 2	D	240	244	parallel
Strand 3	D	167	172	parallel
Strand 4	D	276	280	parallel
Strand 5	D	320	323	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9X6F

Analysis of interatomic Contacts of Structural Units in PDB entry:
9X6F