Analysis of interatomic Contacts of Structural Units in PDB entry:
9X6L


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9X6L entry

There are 4 chains in PDB entry 9X6L (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 23LEU 270
B
 ASN 30LEU 270
C
 ASN 23LEU 270
D
 HIS 10LEU 270
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 50 helices in PDB entry 9X6L. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
25 29Right-handed 310
Helix 2
AA2
A
45 57Right-handed alpha
Helix 3
AA3
A
68 80Right-handed alpha
Helix 4
AA4
A
92 98Right-handed alpha
Helix 5
AA5
A
98 108Right-handed alpha
Helix 6
AA6
A
124 128Right-handed 310
Helix 7
AA7
A
129 141Right-handed alpha
Helix 8
AA8
A
141 159Right-handed alpha
Helix 9
AA9
A
168 172Right-handed 310
Helix 10
AB1
A
178 200Right-handed alpha
Helix 11
AB2
A
216 220Right-handed 310
Helix 12
AB3
A
223 233Right-handed alpha
Helix 13
AB4
A
239 251Right-handed alpha
Helix 14
AB5
B
45 58Right-handed alpha
Helix 15
AB6
B
68 78Right-handed alpha
Helix 16
AB7
B
92 98Right-handed alpha
Helix 17
AB8
B
98 108Right-handed alpha
Helix 18
AB9
B
124 128Right-handed 310
Helix 19
AC1
B
129 141Right-handed alpha
Helix 20
AC2
B
141 158Right-handed alpha
Helix 21
AC3
B
168 172Right-handed 310
Helix 22
AC4
B
178 200Right-handed alpha
Helix 23
AC5
B
216 220Right-handed 310
Helix 24
AC6
B
223 233Right-handed alpha
Helix 25
AC7
B
239 251Right-handed alpha
Helix 26
AC8
C
26 31Right-handed 310
Helix 27
AC9
C
45 58Right-handed alpha
Helix 28
AD1
C
69 78Right-handed alpha
Helix 29
AD2
C
92 98Right-handed alpha
Helix 30
AD3
C
98 108Right-handed alpha
Helix 31
AD4
C
124 128Right-handed 310
Helix 32
AD5
C
129 141Right-handed alpha
Helix 33
AD6
C
141 158Right-handed alpha
Helix 34
AD7
C
168 172Right-handed 310
Helix 35
AD8
C
178 200Right-handed alpha
Helix 36
AD9
C
216 220Right-handed 310
Helix 37
AE1
C
224 233Right-handed alpha
Helix 38
AE2
C
239 251Right-handed alpha
Helix 39
AE3
D
26 31Right-handed 310
Helix 40
AE4
D
45 58Right-handed alpha
Helix 41
AE5
D
68 80Right-handed alpha
Helix 42
AE6
D
92 98Right-handed alpha
Helix 43
AE7
D
98 108Right-handed alpha
Helix 44
AE8
D
124 128Right-handed 310
Helix 45
AE9
D
129 141Right-handed alpha
Helix 46
AF1
D
141 159Right-handed alpha
Helix 47
AF2
D
168 172Right-handed 310
Helix 48
AF3
D
178 200Right-handed alpha
Helix 49
AF4
D
224 233Right-handed alpha
Helix 50
AF5
D
239 251Right-handed alpha
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There are 2 sheets in PDB entry 9X6L. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 14 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
83 87first strand
Strand 2
A
61 66parallel
Strand 3
A
37 41parallel
Strand 4
A
112 115parallel
Strand 5
A
161 166parallel
Strand 6
A
204 211parallel
Strand 7
A
256 265parallel
Strand 8
D
256 265anti-parallel
Strand 9
D
204 211parallel
Strand 10
D
161 166parallel
Strand 11
D
112 115parallel
Strand 12
D
37 40parallel
Strand 13
D
61 66parallel
Strand 14
D
83 87parallel
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There are 14 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
83 87first strand
Strand 2
B
61 66parallel
Strand 3
B
37 40parallel
Strand 4
B
112 115parallel
Strand 5
B
161 166parallel
Strand 6
B
204 211parallel
Strand 7
B
256 265parallel
Strand 8
C
256 265anti-parallel
Strand 9
C
204 211parallel
Strand 10
C
161 166parallel
Strand 11
C
112 115parallel
Strand 12
C
37 40parallel
Strand 13
C
61 66parallel
Strand 14
C
83 87parallel
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