Analysis of interatomic Contacts of Structural Units in PDB entry:
9X6Q


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9X6Q entry

There are 2 chains in PDB entry 9X6Q (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 1ILE 483
B
 SER 1ILE 483
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 53 helices in PDB entry 9X6Q. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
8 24Right-handed alpha
Helix 2
AA2
A
52 69Right-handed alpha
Helix 3
AA3
A
70 72Right-handed 310
Helix 4
AA4
A
73 81Right-handed alpha
Helix 5
AA5
A
82 96Right-handed alpha
Helix 6
AA6
A
99 101Right-handed 310
Helix 7
AA7
A
102 107Right-handed alpha
Helix 8
AA8
A
107 112Right-handed alpha
Helix 9
AA9
A
117 135Right-handed alpha
Helix 10
AB1
A
140 144Right-handed 310
Helix 11
AB2
A
160 181Right-handed alpha
Helix 12
AB3
A
191 202Right-handed alpha
Helix 13
AB4
A
224 235Right-handed alpha
Helix 14
AB5
A
241 260Right-handed alpha
Helix 15
AB6
A
264 288Right-handed alpha
Helix 16
AB7
A
300 304Right-handed 310
Helix 17
AB8
A
306 318Right-handed alpha
Helix 18
AB9
A
321 323Right-handed 310
Helix 19
AC1
A
324 338Right-handed alpha
Helix 20
AC2
A
341 351Right-handed alpha
Helix 21
AC3
A
354 361Right-handed alpha
Helix 22
AC4
A
380 393Right-handed alpha
Helix 23
AC5
A
399 406Right-handed 310
Helix 24
AC6
A
409 416Right-handed 310
Helix 25
AC7
A
422 436Right-handed alpha
Helix 26
AC8
A
441 445Right-handed 310
Helix 27
AC9
A
448 458Right-handed alpha
Helix 28
AD1
A
474 478Right-handed 310
Helix 29
AD2
B
8 23Right-handed alpha
Helix 30
AD3
B
52 69Right-handed alpha
Helix 31
AD4
B
73 81Right-handed alpha
Helix 32
AD5
B
82 95Right-handed alpha
Helix 33
AD6
B
99 101Right-handed 310
Helix 34
AD7
B
102 107Right-handed alpha
Helix 35
AD8
B
107 112Right-handed alpha
Helix 36
AD9
B
117 135Right-handed alpha
Helix 37
AE1
B
157 180Right-handed alpha
Helix 38
AE2
B
192 202Right-handed alpha
Helix 39
AE3
B
223 235Right-handed alpha
Helix 40
AE4
B
239 258Right-handed alpha
Helix 41
AE5
B
264 288Right-handed alpha
Helix 42
AE6
B
300 304Right-handed 310
Helix 43
AE7
B
306 319Right-handed alpha
Helix 44
AE8
B
321 323Right-handed 310
Helix 45
AE9
B
324 338Right-handed alpha
Helix 46
AF1
B
340 351Right-handed alpha
Helix 47
AF2
B
354 362Right-handed alpha
Helix 48
AF3
B
380 393Right-handed alpha
Helix 49
AF4
B
399 406Right-handed 310
Helix 50
AF5
B
409 416Right-handed 310
Helix 51
AF6
B
422 439Right-handed alpha
Helix 52
AF7
B
448 461Right-handed alpha
Helix 53
AF8
B
474 478Right-handed 310
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There are 3 sheets in PDB entry 9X6Q. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
153 155first strand
Strand 2
A
479 481parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
217 218first strand
Strand 2
A
222 223anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
153 156first strand
Strand 2
B
479 482parallel
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