Analysis of interatomic Contacts of Structural Units in PDB entry:
9X6Z

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9X6Z entry

There are 3 chains in PDB entry 9X6Z (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLY 34	GLU 1042
B	GLY 34	GLU 1042
C	GLY 34	GLU 1042

There are 69 helices in PDB entry 9X6Z. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	43	47	Right-handed 310
Helix 2	AA2	A	257	267	Right-handed alpha
Helix 3	AA3	A	333	337	Right-handed 310
Helix 4	AA4	A	372	376	Right-handed 310
Helix 5	AA5	A	607	614	Right-handed alpha
Helix 6	AA6	A	616	624	Right-handed alpha
Helix 7	AA7	A	626	634	Right-handed alpha
Helix 8	AA8	A	634	652	Right-handed alpha
Helix 9	AA9	A	655	661	Right-handed alpha
Helix 10	AB1	A	663	668	Right-handed alpha
Helix 11	AB2	A	691	700	Right-handed alpha
Helix 12	AB3	A	713	718	Right-handed alpha
Helix 13	AB4	A	723	732	Right-handed alpha
Helix 14	AB5	A	741	755	Right-handed alpha
Helix 15	AB6	A	768	781	Right-handed alpha
Helix 16	AB7	A	789	810	Right-handed alpha
Helix 17	AB8	A	820	849	Right-handed alpha
Helix 18	AB9	A	850	853	Right-handed 310
Helix 19	AC1	A	861	869	Right-handed alpha
Helix 20	AC2	A	870	918	Right-handed alpha
Helix 21	AC3	A	1004	1006	Right-handed 310
Helix 22	AC4	A	1023	1029	Right-handed 310
Helix 23	AC5	A	1035	1042	Right-handed alpha
Helix 24	AC6	B	43	47	Right-handed 310
Helix 25	AC7	B	257	267	Right-handed alpha
Helix 26	AC8	B	333	337	Right-handed 310
Helix 27	AC9	B	372	376	Right-handed 310
Helix 28	AD1	B	607	614	Right-handed alpha
Helix 29	AD2	B	616	624	Right-handed alpha
Helix 30	AD3	B	626	634	Right-handed alpha
Helix 31	AD4	B	634	652	Right-handed alpha
Helix 32	AD5	B	655	661	Right-handed alpha
Helix 33	AD6	B	663	668	Right-handed alpha
Helix 34	AD7	B	691	700	Right-handed alpha
Helix 35	AD8	B	713	718	Right-handed alpha
Helix 36	AD9	B	723	732	Right-handed alpha
Helix 37	AE1	B	741	755	Right-handed alpha
Helix 38	AE2	B	768	781	Right-handed alpha
Helix 39	AE3	B	789	810	Right-handed alpha
Helix 40	AE4	B	820	849	Right-handed alpha
Helix 41	AE5	B	850	853	Right-handed 310
Helix 42	AE6	B	861	869	Right-handed alpha
Helix 43	AE7	B	870	918	Right-handed alpha
Helix 44	AE8	B	1004	1006	Right-handed 310
Helix 45	AE9	B	1023	1029	Right-handed 310
Helix 46	AF1	B	1035	1042	Right-handed alpha
Helix 47	AF2	C	43	47	Right-handed 310
Helix 48	AF3	C	257	267	Right-handed alpha
Helix 49	AF4	C	333	337	Right-handed 310
Helix 50	AF5	C	372	376	Right-handed 310
Helix 51	AF6	C	607	614	Right-handed alpha
Helix 52	AF7	C	616	624	Right-handed alpha
Helix 53	AF8	C	626	634	Right-handed alpha
Helix 54	AF9	C	634	652	Right-handed alpha
Helix 55	AG1	C	655	661	Right-handed alpha
Helix 56	AG2	C	663	668	Right-handed alpha
Helix 57	AG3	C	691	700	Right-handed alpha
Helix 58	AG4	C	713	718	Right-handed alpha
Helix 59	AG5	C	723	732	Right-handed alpha
Helix 60	AG6	C	741	755	Right-handed alpha
Helix 61	AG7	C	768	781	Right-handed alpha
Helix 62	AG8	C	789	810	Right-handed alpha
Helix 63	AG9	C	820	849	Right-handed alpha
Helix 64	AH1	C	850	853	Right-handed 310
Helix 65	AH2	C	861	869	Right-handed alpha
Helix 66	AH3	C	870	918	Right-handed alpha
Helix 67	AH4	C	1004	1006	Right-handed 310
Helix 68	AH5	C	1023	1029	Right-handed 310
Helix 69	AH6	C	1035	1042	Right-handed alpha

There are 39 sheets in PDB entry 9X6Z. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	68	83	first strand
Strand 2	A	231	245	anti-parallel
Strand 3	A	116	120	anti-parallel
Strand 4	A	192	196	anti-parallel
Strand 5	A	200	203	anti-parallel
Strand 6	A	206	210	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	68	83	first strand
Strand 2	A	231	245	anti-parallel
Strand 3	A	249	254	anti-parallel

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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	94	96	first strand
Strand 2	A	216	221	anti-parallel
Strand 3	A	132	136	anti-parallel
Strand 4	A	140	143	anti-parallel
Strand 5	A	168	173	anti-parallel
Strand 6	A	179	184	anti-parallel

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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	274	278	first strand
Strand 2	A	501	505	anti-parallel
Strand 3	A	510	514	anti-parallel
Strand 4	A	534	537	anti-parallel
Strand 5	A	526	529	anti-parallel

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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	288	291	first strand
Strand 2	A	446	451	parallel
Strand 3	A	454	463	anti-parallel
Strand 4	A	491	495	anti-parallel
Strand 5	A	480	484	anti-parallel
Strand 6	A	472	474	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	327	329	first strand
Strand 2	A	302	306	anti-parallel
Strand 3	A	348	351	parallel

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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	339	340	first strand
Strand 2	A	381	388	anti-parallel
Strand 3	A	409	426	anti-parallel
Strand 4	A	396	404	anti-parallel
Strand 5	A	360	364	anti-parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	548	550	first strand
Strand 2	A	553	555	anti-parallel
Strand 3	A	561	563	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	567	568	first strand
Strand 2	C	653	654	parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	580	597	first strand
Strand 2	A	944	963	anti-parallel
Strand 3	A	932	941	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	580	597	first strand
Strand 2	A	944	963	anti-parallel
Strand 3	A	981	986	anti-parallel
Strand 4	A	989	994	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	604	606	first strand
Strand 2	A	733	735	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	653	654	first strand
Strand 2	B	567	568	parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1008	1010	first strand
Strand 2	A	972	976	anti-parallel
Strand 3	A	966	968	anti-parallel
Strand 4	A	1019	1021	parallel

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There are 6 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	68	83	first strand
Strand 2	B	231	245	anti-parallel
Strand 3	B	116	120	anti-parallel
Strand 4	B	192	196	anti-parallel
Strand 5	B	200	203	anti-parallel
Strand 6	B	206	210	anti-parallel

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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	68	83	first strand
Strand 2	B	231	245	anti-parallel
Strand 3	B	249	254	anti-parallel

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There are 6 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	94	96	first strand
Strand 2	B	216	221	anti-parallel
Strand 3	B	132	136	anti-parallel
Strand 4	B	140	143	anti-parallel
Strand 5	B	168	173	anti-parallel
Strand 6	B	179	184	anti-parallel

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There are 5 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	274	278	first strand
Strand 2	B	501	505	anti-parallel
Strand 3	B	510	514	anti-parallel
Strand 4	B	534	537	anti-parallel
Strand 5	B	526	529	anti-parallel

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There are 6 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	288	291	first strand
Strand 2	B	446	451	parallel
Strand 3	B	454	463	anti-parallel
Strand 4	B	491	495	anti-parallel
Strand 5	B	480	484	anti-parallel
Strand 6	B	472	474	anti-parallel

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There are 3 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	327	329	first strand
Strand 2	B	302	306	anti-parallel
Strand 3	B	348	351	parallel

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There are 5 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	339	340	first strand
Strand 2	B	381	388	anti-parallel
Strand 3	B	409	426	anti-parallel
Strand 4	B	396	404	anti-parallel
Strand 5	B	360	364	anti-parallel

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There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	548	550	first strand
Strand 2	B	553	555	anti-parallel
Strand 3	B	561	563	anti-parallel

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There are 3 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	580	597	first strand
Strand 2	B	944	963	anti-parallel
Strand 3	B	932	941	anti-parallel

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There are 4 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	580	597	first strand
Strand 2	B	944	963	anti-parallel
Strand 3	B	981	986	anti-parallel
Strand 4	B	989	994	anti-parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	604	606	first strand
Strand 2	B	733	735	anti-parallel

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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	653	654	first strand
Strand 2	C	567	568	parallel

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There are 4 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1008	1010	first strand
Strand 2	B	972	976	anti-parallel
Strand 3	B	966	968	anti-parallel
Strand 4	B	1019	1021	parallel

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There are 6 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	68	83	first strand
Strand 2	C	231	245	anti-parallel
Strand 3	C	116	120	anti-parallel
Strand 4	C	192	196	anti-parallel
Strand 5	C	200	203	anti-parallel
Strand 6	C	206	210	anti-parallel

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There are 3 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	68	83	first strand
Strand 2	C	231	245	anti-parallel
Strand 3	C	249	254	anti-parallel

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There are 6 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	94	96	first strand
Strand 2	C	216	221	anti-parallel
Strand 3	C	132	136	anti-parallel
Strand 4	C	140	143	anti-parallel
Strand 5	C	168	173	anti-parallel
Strand 6	C	179	184	anti-parallel

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There are 5 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	274	278	first strand
Strand 2	C	501	505	anti-parallel
Strand 3	C	510	514	anti-parallel
Strand 4	C	534	537	anti-parallel
Strand 5	C	526	529	anti-parallel

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There are 6 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	288	291	first strand
Strand 2	C	446	451	parallel
Strand 3	C	454	463	anti-parallel
Strand 4	C	491	495	anti-parallel
Strand 5	C	480	484	anti-parallel
Strand 6	C	472	474	anti-parallel

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There are 3 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	327	329	first strand
Strand 2	C	302	306	anti-parallel
Strand 3	C	348	351	parallel

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There are 5 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	339	340	first strand
Strand 2	C	381	388	anti-parallel
Strand 3	C	409	426	anti-parallel
Strand 4	C	396	404	anti-parallel
Strand 5	C	360	364	anti-parallel

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There are 3 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	548	550	first strand
Strand 2	C	553	555	anti-parallel
Strand 3	C	561	563	anti-parallel

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There are 3 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	580	597	first strand
Strand 2	C	944	963	anti-parallel
Strand 3	C	932	941	anti-parallel

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There are 4 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	580	597	first strand
Strand 2	C	944	963	anti-parallel
Strand 3	C	981	986	anti-parallel
Strand 4	C	989	994	anti-parallel

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There are 2 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	604	606	first strand
Strand 2	C	733	735	anti-parallel

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There are 4 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1008	1010	first strand
Strand 2	C	972	976	anti-parallel
Strand 3	C	966	968	anti-parallel
Strand 4	C	1019	1021	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9X6Z

Analysis of interatomic Contacts of Structural Units in PDB entry:
9X6Z