Analysis of interatomic Contacts of Structural Units in PDB entry:
9X86


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9X86 entry

There is 1 chain in PDB entry 9X86 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 1PRO 293
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 11 helices in PDB entry 9X86. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
1 16Right-handed alpha
Helix 2
AA2
A
17 24Right-handed alpha
Helix 3
AA3
A
53 65Right-handed alpha
Helix 4
AA4
A
69 81Right-handed alpha
Helix 5
AA5
A
81 91Right-handed alpha
Helix 6
AA6
A
161 173Right-handed alpha
Helix 7
AA7
A
174 183Right-handed alpha
Helix 8
AA8
A
209 213Right-handed 310
Helix 9
AA9
A
214 229Right-handed alpha
Helix 10
AB1
A
230 232Right-handed 310
Helix 11
AB2
A
233 244Right-handed alpha
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There are 3 sheets in PDB entry 9X86. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
25 26first strand
Strand 2
A
102 106parallel
Strand 3
A
115 120anti-parallel
Strand 4
A
124 131anti-parallel
Strand 5
A
134 136anti-parallel
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There are 9 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
47 48first strand
Strand 2
A
102 106anti-parallel
Strand 3
A
115 120anti-parallel
Strand 4
A
124 131anti-parallel
Strand 5
A
140 144anti-parallel
Strand 6
A
286 291anti-parallel
Strand 7
A
273 278anti-parallel
Strand 8
A
263 268anti-parallel
Strand 9
A
250 255anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
149 150first strand
Strand 2
A
155 157anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il