Analysis of interatomic Contacts of Structural Units in PDB entry:
9XA0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9XA0 entry

There are 5 chains in PDB entry 9XA0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
C
 VAL 11SER 301
D
 VAL 2SER 223
E
 ASP 0GLU 214
A
 GLU 1PRO 222
B
 VAL 1CYS 214
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 16 helices in PDB entry 9XA0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
C
143 147Right-handed 310
Helix 2
AA2
C
153 155Right-handed 310
Helix 3
AA3
C
290 299Right-handed alpha
Helix 4
AA4
D
62 65Right-handed 310
Helix 5
AA5
D
87 91Right-handed 310
Helix 6
AA6
D
195 200Right-handed alpha
Helix 7
AA7
D
209 212Right-handed 310
Helix 8
AA8
E
80 84Right-handed 310
Helix 9
AA9
E
125 130Right-handed alpha
Helix 10
AB1
E
185 192Right-handed alpha
Helix 11
AB2
A
87 91Right-handed 310
Helix 12
AB3
A
136 140Right-handed 310
Helix 13
AB4
A
165 167Right-handed 310
Helix 14
AB5
B
79 83Right-handed 310
Helix 15
AB6
B
121 128Right-handed alpha
Helix 16
AB7
B
183 188Right-handed alpha
Back to top of page

There are 27 sheets in PDB entry 9XA0. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
23 29first strand
Strand 2
C
62 68anti-parallel
Strand 3
C
259 265anti-parallel
Strand 4
C
88 92anti-parallel
Strand 5
C
184 194anti-parallel
Strand 6
C
197 207anti-parallel
Strand 7
C
218 225anti-parallel
Strand 8
C
36 37parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
47 55first strand
Strand 2
C
267 275anti-parallel
Strand 3
C
281 286anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
81 83first strand
Strand 2
C
233 241anti-parallel
Strand 3
C
139 141parallel
Strand 4
C
151 152anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
81 83first strand
Strand 2
C
233 241anti-parallel
Strand 3
C
99 105anti-parallel
Strand 4
C
114 119anti-parallel
Strand 5
C
124 133anti-parallel
Strand 6
C
157 169anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
5 6first strand
Strand 2
D
18 23anti-parallel
Strand 3
D
78 83anti-parallel
Strand 4
D
68 73anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
10 12first strand
Strand 2
D
115 119parallel
Strand 3
D
92 100anti-parallel
Strand 4
D
32 39anti-parallel
Strand 5
D
45 52anti-parallel
Strand 6
D
57 60anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
10 12first strand
Strand 2
D
115 119parallel
Strand 3
D
92 100anti-parallel
Strand 4
D
108 110anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
128 132first strand
Strand 2
D
143 153anti-parallel
Strand 3
D
184 193anti-parallel
Strand 4
D
171 173anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
128 132first strand
Strand 2
D
143 153anti-parallel
Strand 3
D
184 193anti-parallel
Strand 4
D
177 178anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
159 162first strand
Strand 2
D
202 208anti-parallel
Strand 3
D
213 219anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
9 12first strand
Strand 2
E
105 109parallel
Strand 3
E
86 93anti-parallel
Strand 4
E
34 39anti-parallel
Strand 5
E
46 49anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
9 12first strand
Strand 2
E
105 109parallel
Strand 3
E
86 93anti-parallel
Strand 4
E
98 101anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
18 23first strand
Strand 2
E
71 76anti-parallel
Strand 3
E
63 68anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
120 122first strand
Strand 2
E
134 143anti-parallel
Strand 3
E
176 184anti-parallel
Strand 4
E
163 165anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
120 122first strand
Strand 2
E
134 143anti-parallel
Strand 3
E
176 184anti-parallel
Strand 4
E
169 170anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
157 159first strand
Strand 2
E
149 154anti-parallel
Strand 3
E
195 201anti-parallel
Strand 4
E
204 210anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
3 7first strand
Strand 2
A
18 25anti-parallel
Strand 3
A
78 83anti-parallel
Strand 4
A
68 73anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in AB9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
11 12first strand
Strand 2
A
116 120parallel
Strand 3
A
92 98anti-parallel
Strand 4
A
34 39anti-parallel
Strand 5
A
45 51anti-parallel
Strand 6
A
58 60anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
11 12first strand
Strand 2
A
116 120parallel
Strand 3
A
92 98anti-parallel
Strand 4
A
111 112anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
129 133first strand
Strand 2
A
144 154anti-parallel
Strand 3
A
185 194anti-parallel
Strand 4
A
172 174anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
129 133first strand
Strand 2
A
144 154anti-parallel
Strand 3
A
185 194anti-parallel
Strand 4
A
178 179anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
160 163first strand
Strand 2
A
203 209anti-parallel
Strand 3
A
214 220anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
5 7first strand
Strand 2
B
19 24anti-parallel
Strand 3
B
70 75anti-parallel
Strand 4
B
62 67anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in AC6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
10 12first strand
Strand 2
B
102 105parallel
Strand 3
B
84 90anti-parallel
Strand 4
B
33 38anti-parallel
Strand 5
B
45 49anti-parallel
Strand 6
B
53 54anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AC7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
10 12first strand
Strand 2
B
102 105parallel
Strand 3
B
84 90anti-parallel
Strand 4
B
97 98anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AC8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
115 118first strand
Strand 2
B
129 139anti-parallel
Strand 3
B
173 182anti-parallel
Strand 4
B
159 163anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AC9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
144 150first strand
Strand 2
B
191 198anti-parallel
Strand 3
B
205 210anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il