Analysis of interatomic Contacts of Structural Units in PDB entry:
9XBL


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9XBL entry

There are 5 chains in PDB entry 9XBL (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 7GLN 62
B
 GLY 7GLN 62
C
 GLY 7GLN 62
D
 GLY 7GLN 62
E
 GLY 7GLN 62
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are no helices in PDB entry 9XBL

There are 4 sheets in PDB entry 9XBL. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
8 16first strand
Strand 2
B
8 16parallel
Strand 3
A
8 16parallel
Strand 4
C
8 16parallel
Strand 5
E
8 16parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
28 39first strand
Strand 2
B
28 39parallel
Strand 3
A
28 39parallel
Strand 4
C
28 39parallel
Strand 5
E
28 39parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
45 57first strand
Strand 2
B
45 57parallel
Strand 3
A
45 57parallel
Strand 4
C
45 57parallel
Strand 5
E
45 57parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
60 61first strand
Strand 2
B
60 61parallel
Strand 3
A
60 61parallel
Strand 4
C
60 61parallel
Strand 5
E
60 61parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il