Analysis of interatomic Contacts of Structural Units in PDB entry:
9XBM


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9XBM entry

There are 5 chains in PDB entry 9XBM (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 TYR 69GLN 133
B
 TYR 69GLN 133
C
 TYR 69GLN 133
D
 TYR 69GLN 133
E
 TYR 69GLN 133
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are no helices in PDB entry 9XBM

There are 5 sheets in PDB entry 9XBM. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
70 73first strand
Strand 2
B
70 73parallel
Strand 3
A
70 73parallel
Strand 4
C
70 73parallel
Strand 5
E
70 73parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
79 82first strand
Strand 2
B
79 82parallel
Strand 3
A
79 82parallel
Strand 4
C
79 82parallel
Strand 5
E
79 82parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
85 87first strand
Strand 2
B
85 87parallel
Strand 3
A
85 87parallel
Strand 4
C
85 87parallel
Strand 5
E
85 87parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
98 114first strand
Strand 2
B
98 114parallel
Strand 3
A
98 114parallel
Strand 4
C
98 114parallel
Strand 5
E
98 114parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
122 132first strand
Strand 2
B
122 132parallel
Strand 3
A
122 132parallel
Strand 4
C
122 132parallel
Strand 5
E
122 132parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il