Analysis of interatomic Contacts of Structural Units in PDB entry:
9XBP


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9XBP entry

There are 5 chains in PDB entry 9XBP (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 87ASN 229
B
 GLY 87ASN 229
C
 GLY 87ASN 229
D
 GLY 87ASN 229
E
 GLY 87ASN 229
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page
There are no helices in PDB entry 9XBP

There are 5 sheets in PDB entry 9XBP. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
88 89first strand
Strand 2
B
88 89parallel
Strand 3
A
88 89parallel
Strand 4
C
88 89parallel
Strand 5
E
88 89parallel
Back to list of sheets
Back to top of page

There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
98 110first strand
Strand 2
B
98 110parallel
Strand 3
A
98 110parallel
Strand 4
C
98 110parallel
Strand 5
E
98 110parallel
Back to list of sheets
Back to top of page

There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
113 117first strand
Strand 2
B
113 117parallel
Strand 3
A
113 117parallel
Strand 4
C
113 117parallel
Strand 5
E
113 117parallel
Back to list of sheets
Back to top of page

There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
124 128first strand
Strand 2
B
124 128parallel
Strand 3
A
124 128parallel
Strand 4
C
124 128parallel
Strand 5
E
124 128parallel
Back to list of sheets
Back to top of page

There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
218 228first strand
Strand 2
B
218 228parallel
Strand 3
A
218 228parallel
Strand 4
C
218 228parallel
Strand 5
E
218 228parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il