Analysis of interatomic Contacts of Structural Units in PDB entry:
9XF5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9XF5 entry

There is 1 chain in PDB entry 9XF5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 46LYS 425
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 21 helices in PDB entry 9XF5. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
56 75Right-handed alpha
Helix 2
AA2
A
89 100Right-handed alpha
Helix 3
AA3
A
113 121Right-handed alpha
Helix 4
AA4
A
131 137Right-handed alpha
Helix 5
AA5
A
140 146Right-handed alpha
Helix 6
AA6
A
169 175Right-handed alpha
Helix 7
AA7
A
183 196Right-handed alpha
Helix 8
AA8
A
208 219Right-handed alpha
Helix 9
AA9
A
237 253Right-handed alpha
Helix 10
AB1
A
257 262Right-handed 310
Helix 11
AB2
A
266 271Right-handed alpha
Helix 12
AB3
A
282 289Right-handed alpha
Helix 13
AB4
A
289 295Right-handed alpha
Helix 14
AB5
A
325 337Right-handed alpha
Helix 15
AB6
A
338 346Right-handed alpha
Helix 16
AB7
A
347 349Right-handed 310
Helix 17
AB8
A
354 359Right-handed alpha
Helix 18
AB9
A
360 365Right-handed alpha
Helix 19
AC1
A
369 377Right-handed alpha
Helix 20
AC2
A
387 404Right-handed alpha
Helix 21
AC3
A
408 424Right-handed alpha
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There are 3 sheets in PDB entry 9XF5. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
78 84first strand
Strand 2
A
47 53parallel
Strand 3
A
106 110parallel
Strand 4
A
313 319anti-parallel
Strand 5
A
156 161anti-parallel
Strand 6
A
351 352anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
148 149first strand
Strand 2
A
152 153anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
200 203first strand
Strand 2
A
275 280parallel
Strand 3
A
164 168anti-parallel
Strand 4
A
296 299anti-parallel
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