Analysis of interatomic Contacts of Structural Units in PDB entry:
9XG1


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9XG1 entry

There is 1 chain in PDB entry 9XG1 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 30HIS 793
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 9XG1. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
88 92Right-handed 310
Helix 2
AA2
A
214 218Right-handed 310
Helix 3
AA3
A
219 229Right-handed alpha
Helix 4
AA4
A
238 245Right-handed alpha
Helix 5
AA5
A
254 275Right-handed alpha
Helix 6
AA6
A
281 285Right-handed 310
Helix 7
AA7
A
299 315Right-handed alpha
Helix 8
AA8
A
358 366Right-handed alpha
Helix 9
AA9
A
386 389Right-handed 310
Helix 10
AB1
A
390 398Right-handed alpha
Helix 11
AB2
A
399 405Right-handed alpha
Helix 12
AB3
A
423 443Right-handed alpha
Helix 13
AB4
A
446 453Right-handed 310
Helix 14
AB5
A
475 477Right-handed 310
Helix 15
AB6
A
510 514Right-handed 310
Helix 16
AB7
A
523 527Right-handed 310
Helix 17
AB8
A
603 607Right-handed alpha
Helix 18
AB9
A
634 636Right-handed 310
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There are 10 sheets in PDB entry 9XG1. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
33 40first strand
Strand 2
A
43 50anti-parallel
Strand 3
A
81 86anti-parallel
Strand 4
A
74 75anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
68 72first strand
Strand 2
A
61 65anti-parallel
Strand 3
A
97 101anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
126 127first strand
Strand 2
A
460 463parallel
Strand 3
A
466 473anti-parallel
Strand 4
A
376 381anti-parallel
Strand 5
A
342 347parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
139 142first strand
Strand 2
A
165 172anti-parallel
Strand 3
A
145 146anti-parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
139 142first strand
Strand 2
A
165 172anti-parallel
Strand 3
A
232 236anti-parallel
Strand 4
A
178 184parallel
Strand 5
A
288 298parallel
Strand 6
A
321 327parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
199 200first strand
Strand 2
A
191 192anti-parallel
Strand 3
A
211 212anti-parallel
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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
479 483first strand
Strand 2
A
656 666anti-parallel
Strand 3
A
544 558anti-parallel
Strand 4
A
644 651anti-parallel
Strand 5
A
587 593anti-parallel
Strand 6
A
598 602anti-parallel
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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
492 503first strand
Strand 2
A
544 558anti-parallel
Strand 3
A
656 666anti-parallel
Strand 4
A
571 578anti-parallel
Strand 5
A
627 632anti-parallel
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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
738 744first strand
Strand 2
A
694 701anti-parallel
Strand 3
A
680 683anti-parallel
Strand 4
A
770 771parallel
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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
686 689first strand
Strand 2
A
775 781parallel
Strand 3
A
756 767anti-parallel
Strand 4
A
709 715anti-parallel
Strand 5
A
726 732anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il