Analysis of interatomic Contacts of Structural Units in PDB entry:
9XGK


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9XGK entry

There are 19 chains in PDB entry 9XGK (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
SER 11PRO 1487
B
GLU 16VAL 1174
C
PRO 2VAL 271
D
GLU 14GLN 141
E
ASP 2GLN 210
F
GLN 46ASP 127
G
MET 1VAL 171
H
ALA 2ALA 149
I
VAL 12GLU 125
J
MET 1LYS 67
K
MET 1GLY 115
L
MET 15ARG 58
M
THR 1THR 1
M
PRO 3PRO 3
M
THR 7THR 7
M
PRO 9PRO 9
N
A 13 A 42
P
C 3 C 13
T
T 6 T 37
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are130 helices in PDB entry 9XGK. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
27 35Right-handed alpha
Helix 2
AA2
A
99 110Right-handed alpha
Helix 3
AA3
A
123 133Right-handed alpha
Helix 4
AA4
A
136 150Right-handed alpha
Helix 5
AA5
A
217 227Right-handed alpha
Helix 6
AA6
A
229 236Right-handed alpha
Helix 7
AA7
A
244 247Right-handed 310
Helix 8
AA8
A
274 297Right-handed alpha
Helix 9
AA9
A
301 319Right-handed alpha
Helix 10
AB1
A
338 345Right-handed alpha
Helix 11
AB2
A
349 354Right-handed alpha
Helix 12
AB3
A
381 388Right-handed alpha
Helix 13
AB4
A
395 397Right-handed 310
Helix 14
AB5
A
398 409Right-handed alpha
Helix 15
AB6
A
434 438Right-handed 310
Helix 16
AB7
A
465 467Right-handed 310
Helix 17
AB8
A
488 493Right-handed alpha
Helix 18
AB9
A
508 519Right-handed alpha
Helix 19
AC1
A
521 525Right-handed 310
Helix 20
AC2
A
539 550Right-handed alpha
Helix 21
AC3
A
556 566Right-handed alpha
Helix 22
AC4
A
588 596Right-handed alpha
Helix 23
AC5
A
641 646Right-handed alpha
Helix 24
AC6
A
651 660Right-handed alpha
Helix 25
AC7
A
662 684Right-handed alpha
Helix 26
AC8
A
689 693Right-handed 310
Helix 27
AC9
A
695 722Right-handed alpha
Helix 28
AD1
A
732 760Right-handed alpha
Helix 29
AD2
A
764 773Right-handed alpha
Helix 30
AD3
A
777 786Right-handed alpha
Helix 31
AD4
A
832 869Right-handed alpha
Helix 32
AD5
A
890 894Right-handed 310
Helix 33
AD6
A
912 921Right-handed alpha
Helix 34
AD7
A
928 934Right-handed alpha
Helix 35
AD8
A
935 945Right-handed alpha
Helix 36
AD9
A
945 970Right-handed alpha
Helix 37
AE1
A
971 974Right-handed 310
Helix 38
AE2
A
982 994Right-handed alpha
Helix 39
AE3
A
1005 1020Right-handed alpha
Helix 40
AE4
A
1027 1049Right-handed alpha
Helix 41
AE5
A
1050 1057Right-handed alpha
Helix 42
AE6
A
1061 1080Right-handed alpha
Helix 43
AE7
A
1086 1100Right-handed alpha
Helix 44
AE8
A
1120 1130Right-handed alpha
Helix 45
AE9
A
1145 1150Right-handed alpha
Helix 46
AF1
A
1150 1162Right-handed alpha
Helix 47
AF2
A
1189 1199Right-handed alpha
Helix 48
AF3
A
1217 1225Right-handed alpha
Helix 49
AF4
A
1227 1239Right-handed alpha
Helix 50
AF5
A
1281 1296Right-handed alpha
Helix 51
AF6
A
1342 1349Right-handed alpha
Helix 52
AF7
A
1361 1367Right-handed alpha
Helix 53
AF8
A
1370 1388Right-handed alpha
Helix 54
AF9
A
1394 1406Right-handed alpha
Helix 55
AG1
A
1415 1421Right-handed alpha
Helix 56
AG2
A
1425 1431Right-handed alpha
Helix 57
AG3
A
1435 1446Right-handed alpha
Helix 58
AG4
A
1453 1460Right-handed alpha
Helix 59
AG5
A
1476 1482Right-handed alpha
Helix 60
AG6
B
21 37Right-handed alpha
Helix 61
AG7
B
40 53Right-handed alpha
Helix 62
AG8
B
53 62Right-handed alpha
Helix 63
AG9
B
109 116Right-handed alpha
Helix 64
AH1
B
167 174Right-handed alpha
Helix 65
AH2
B
248 253Right-handed alpha
Helix 66
AH3
B
269 276Right-handed alpha
Helix 67
AH4
B
280 289Right-handed alpha
Helix 68
AH5
B
294 308Right-handed alpha
Helix 69
AH6
B
313 323Right-handed alpha
Helix 70
AH7
B
331 346Right-handed alpha
Helix 71
AH8
B
357 377Right-handed alpha
Helix 72
AH9
B
395 424Right-handed alpha
Helix 73
AI1
B
437 451Right-handed alpha
Helix 74
AI2
B
474 483Right-handed alpha
Helix 75
AI3
B
496 500Right-handed 310
Helix 76
AI4
B
502 506Right-handed 310
Helix 77
AI5
B
538 548Right-handed alpha
Helix 78
AI6
B
552 556Right-handed 310
Helix 79
AI7
B
559 564Right-handed 310
Helix 80
AI8
B
579 594Right-handed alpha
Helix 81
AI9
B
636 645Right-handed alpha
Helix 82
AJ1
B
652 659Right-handed alpha
Helix 83
AJ2
B
667 671Right-handed alpha
Helix 84
AJ3
B
678 683Right-handed alpha
Helix 85
AJ4
B
699 704Right-handed 310
Helix 86
AJ5
B
713 717Right-handed 310
Helix 87
AJ6
B
718 730Right-handed alpha
Helix 88
AJ7
B
764 768Right-handed 310
Helix 89
AJ8
B
798 803Right-handed alpha
Helix 90
AJ9
B
970 976Right-handed alpha
Helix 91
AK1
B
977 994Right-handed alpha
Helix 92
AK2
B
1007 1017Right-handed alpha
Helix 93
AK3
B
1054 1059Right-handed alpha
Helix 94
AK4
B
1087 1097Right-handed alpha
Helix 95
AK5
B
1099 1109Right-handed alpha
Helix 96
AK6
B
1153 1164Right-handed alpha
Helix 97
AK7
C
27 38Right-handed alpha
Helix 98
AK8
C
60 70Right-handed alpha
Helix 99
AK9
C
116 120Right-handed 310
Helix 100
AL1
C
173 177Right-handed 310
Helix 101
AL2
C
199 203Right-handed 310
Helix 102
AL3
C
240 271Right-handed alpha
Helix 103
AL4
D
16 20Right-handed 310
Helix 104
AL5
D
23 27Right-handed 310
Helix 105
AL6
D
33 50Right-handed alpha
Helix 106
AL7
D
58 71Right-handed alpha
Helix 107
AL8
D
76 90Right-handed alpha
Helix 108
AL9
D
93 104Right-handed alpha
Helix 109
AM1
D
107 115Right-handed alpha
Helix 110
AM2
D
123 138Right-handed alpha
Helix 111
AM3
E
3 24Right-handed alpha
Helix 112
AM4
E
29 34Right-handed alpha
Helix 113
AM5
E
36 44Right-handed alpha
Helix 114
AM6
E
83 98Right-handed alpha
Helix 115
AM7
E
111 121Right-handed alpha
Helix 116
AM8
E
133 136Right-handed 310
Helix 117
AM9
E
152 164Right-handed alpha
Helix 118
AN1
E
177 184Right-handed alpha
Helix 119
AN2
F
58 75Right-handed alpha
Helix 120
AN3
F
88 99Right-handed alpha
Helix 121
AN4
G
14 18Right-handed 310
Helix 122
AN5
G
22 35Right-handed alpha
Helix 123
AN6
I
63 68Right-handed alpha
Helix 124
AN7
I
69 75Right-handed 310
Helix 125
AN8
J
18 28Right-handed alpha
Helix 126
AN9
J
30 38Right-handed alpha
Helix 127
AO1
J
42 51Right-handed alpha
Helix 128
AO2
J
55 60Right-handed alpha
Helix 129
AO3
K
39 53Right-handed alpha
Helix 130
AO4
K
82 113Right-handed alpha
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There are 49 sheets in PDB entry 9XGK. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8, AE9, AF1, AF2, AF3, AF4,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
1448 1449first strand
Strand 2
A
20 22anti-parallel
Strand 3
B
1170 1172anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
86 95first strand
Strand 2
A
249 255anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
190 194first strand
Strand 2
A
197 201anti-parallel
Strand 3
A
214 216anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
264 266first strand
Strand 2
A
270 272anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
329 331first strand
Strand 2
A
334 335anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
357 358first strand
Strand 2
B
1085 1086anti-parallel
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There are 8 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
1060 1061first strand
Strand 2
A
362 369anti-parallel
Strand 3
A
500 504anti-parallel
Strand 4
A
454 459anti-parallel
Strand 5
A
469 476anti-parallel
Strand 6
A
377 380parallel
Strand 7
A
482 484anti-parallel
Strand 8
A
362 369parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
389 393first strand
Strand 2
A
445 449anti-parallel
Strand 3
A
416 420anti-parallel
Strand 4
A
426 428anti-parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
554 555first strand
Strand 2
A
586 587anti-parallel
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There are 9 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
579 581first strand
Strand 2
H
90 101anti-parallel
Strand 3
H
111 118anti-parallel
Strand 4
H
121 128anti-parallel
Strand 5
H
38 44anti-parallel
Strand 6
H
25 32anti-parallel
Strand 7
H
4 14anti-parallel
Strand 8
H
55 61anti-parallel
Strand 9
H
147 148anti-parallel
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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
579 581first strand
Strand 2
H
90 101anti-parallel
Strand 3
H
140 145anti-parallel
Strand 4
H
55 61anti-parallel
Strand 5
H
147 148anti-parallel
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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
602 603first strand
Strand 2
A
629 630anti-parallel
Strand 3
A
635 637anti-parallel
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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
792 793first strand
Strand 2
A
796 797anti-parallel
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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
872 873first strand
Strand 2
A
879 880anti-parallel
Strand 3
A
886 888anti-parallel
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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
902 905first strand
Strand 2
A
976 979anti-parallel
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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
1139 1140first strand
Strand 2
A
1358 1359anti-parallel
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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
1172 1173first strand
Strand 2
I
56 57anti-parallel
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There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
1212 1215first strand
Strand 2
A
1256 1261anti-parallel
Strand 3
A
1243 1246anti-parallel
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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
1307 1310first strand
Strand 2
A
1335 1338anti-parallel
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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
1319 1322first strand
Strand 2
A
1328 1331anti-parallel
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There are 6 strands in AC3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
115 119first strand
Strand 2
F
105 109anti-parallel
Strand 3
A
1472 1475anti-parallel
Strand 4
G
57 59anti-parallel
Strand 5
G
66 77anti-parallel
Strand 6
G
2 13anti-parallel
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There are 7 strands in AC4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
115 119first strand
Strand 2
F
105 109anti-parallel
Strand 3
A
1472 1475anti-parallel
Strand 4
G
57 59anti-parallel
Strand 5
G
66 77anti-parallel
Strand 6
G
43 54anti-parallel
Strand 7
G
38 39anti-parallel
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There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
65 67first strand
Strand 2
B
83 93anti-parallel
Strand 3
B
121 133anti-parallel
Strand 4
B
140 153anti-parallel
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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
97 99first strand
Strand 2
B
105 107anti-parallel
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There are 3 strands in AC7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
185 186first strand
Strand 2
B
191 193anti-parallel
Strand 3
B
468 469anti-parallel
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There are 4 strands in AC8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
391 394first strand
Strand 2
B
196 200anti-parallel
Strand 3
B
484 486parallel
Strand 4
B
523 525anti-parallel
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There are 5 strands in AC9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
206 208first strand
Strand 2
B
215 222anti-parallel
Strand 3
B
234 240anti-parallel
Strand 4
B
256 259anti-parallel
Strand 5
B
267 268anti-parallel
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There are 3 strands in AD1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
531 532first strand
Strand 2
B
621 629anti-parallel
Strand 3
B
662 666anti-parallel
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There are 4 strands in AD2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
632 633first strand
Strand 2
B
621 629anti-parallel
Strand 3
B
695 696anti-parallel
Strand 4
B
675 676parallel
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There are 4 strands in AD3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
572 577first strand
Strand 2
B
565 569anti-parallel
Strand 3
B
612 615parallel
Strand 4
B
602 605anti-parallel
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There are 4 strands in AD4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
748 751first strand
Strand 2
B
808 812anti-parallel
Strand 3
B
917 927anti-parallel
Strand 4
B
815 817anti-parallel
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There are 5 strands in AD5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
748 751first strand
Strand 2
B
808 812anti-parallel
Strand 3
B
917 927anti-parallel
Strand 4
B
902 911anti-parallel
Strand 5
B
859 860anti-parallel
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There are 2 strands in AD6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
759 760first strand
Strand 2
B
997 998parallel
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There are 6 strands in AD7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
935 937first strand
Strand 2
B
1041 1050anti-parallel
Strand 3
B
776 782anti-parallel
Strand 4
B
965 967parallel
Strand 5
B
794 797anti-parallel
Strand 6
B
945 949parallel
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There are 3 strands in AD8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
935 937first strand
Strand 2
B
1041 1050anti-parallel
Strand 3
B
1025 1026anti-parallel
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There are 3 strands in AD9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
827 829first strand
Strand 2
B
869 872anti-parallel
Strand 3
B
889 891anti-parallel
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There are 2 strands in AE1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
1113 1119first strand
Strand 2
B
1146 1152anti-parallel
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There are 2 strands in AE2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
8 9first strand
Strand 2
C
23 24anti-parallel
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There are 5 strands in AE3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
121 122first strand
Strand 2
C
99 106anti-parallel
Strand 3
C
158 168anti-parallel
Strand 4
C
44 55anti-parallel
Strand 5
L
53 56anti-parallel
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There are 2 strands in AE4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
113 115first strand
Strand 2
C
151 153anti-parallel
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There are 2 strands in AE5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
179 185first strand
Strand 2
C
230 235anti-parallel
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There are 3 strands in AE6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
74 75first strand
Strand 2
E
101 106parallel
Strand 3
E
126 131parallel
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There are 4 strands in AE7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
147 150first strand
Strand 2
E
190 195anti-parallel
Strand 3
E
203 209anti-parallel
Strand 4
E
172 173parallel
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There are 7 strands in AE8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
149 153first strand
Strand 2
G
156 160anti-parallel
Strand 3
G
104 109parallel
Strand 4
G
96 101anti-parallel
Strand 5
G
84 92anti-parallel
Strand 6
G
142 146anti-parallel
Strand 7
G
169 170anti-parallel
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There are 3 strands in AE9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
I
25 27first strand
Strand 2
I
36 38anti-parallel
Strand 3
I
45 47anti-parallel
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There are 2 strands in AF1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
I
80 81first strand
Strand 2
I
94 95anti-parallel
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There are 2 strands in AF2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
I
111 113first strand
Strand 2
I
122 124anti-parallel
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There are 4 strands in AF3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
K
21 22first strand
Strand 2
K
30 36anti-parallel
Strand 3
K
70 77anti-parallel
Strand 4
K
56 62anti-parallel
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There are 2 strands in AF4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
L
16 18first strand
Strand 2
L
25 27anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il