Analysis of interatomic Contacts of Structural Units in PDB entry:
9XNX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9XNX entry

There is 1 chain in PDB entry 9XNX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 21ILE 1242
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 21 helices in PDB entry 9XNX. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
221 225Right-handed 310
Helix 2
AA2
A
325 329Right-handed 310
Helix 3
AA3
A
354 358Right-handed 310
Helix 4
AA4
A
466 476Right-handed alpha
Helix 5
AA5
A
807 813Right-handed alpha
Helix 6
AA6
A
816 824Right-handed alpha
Helix 7
AA7
A
828 852Right-handed alpha
Helix 8
AA8
A
855 860Right-handed alpha
Helix 9
AA9
A
895 903Right-handed alpha
Helix 10
AB1
A
917 921Right-handed 310
Helix 11
AB2
A
928 936Right-handed alpha
Helix 12
AB3
A
946 960Right-handed alpha
Helix 13
AB4
A
973 986Right-handed alpha
Helix 14
AB5
A
997 1016Right-handed alpha
Helix 15
AB6
A
1030 1044Right-handed alpha
Helix 16
AB7
A
1045 1054Right-handed alpha
Helix 17
AB8
A
1066 1074Right-handed alpha
Helix 18
AB9
A
1075 1123Right-handed alpha
Helix 19
AC1
A
1216 1218Right-handed 310
Helix 20
AC2
A
1234 1236Right-handed 310
Helix 21
AC3
A
1237 1242Right-handed alpha
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There are 19 sheets in PDB entry 9XNX. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
23 25first strand
Strand 2
A
28 30anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
47 49first strand
Strand 2
A
213 215anti-parallel
Strand 3
A
227 229anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
180 184first strand
Strand 2
A
172 176anti-parallel
Strand 3
A
162 168anti-parallel
Strand 4
A
79 84anti-parallel
Strand 5
A
205 207anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
96 97first strand
Strand 2
A
189 191anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
106 111first strand
Strand 2
A
120 126anti-parallel
Strand 3
A
148 150anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
106 111first strand
Strand 2
A
120 126anti-parallel
Strand 3
A
153 155anti-parallel
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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
270 288first strand
Strand 2
A
438 454anti-parallel
Strand 3
A
318 322anti-parallel
Strand 4
A
397 401anti-parallel
Strand 5
A
405 408anti-parallel
Strand 6
A
411 415anti-parallel
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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
270 288first strand
Strand 2
A
438 454anti-parallel
Strand 3
A
457 460anti-parallel
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There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
296 298first strand
Strand 2
A
419 424anti-parallel
Strand 3
A
335 339anti-parallel
Strand 4
A
344 346anti-parallel
Strand 5
A
372 378anti-parallel
Strand 6
A
349 350anti-parallel
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There are 6 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
296 298first strand
Strand 2
A
419 424anti-parallel
Strand 3
A
335 339anti-parallel
Strand 4
A
344 346anti-parallel
Strand 5
A
372 378anti-parallel
Strand 6
A
384 390anti-parallel
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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
483 488first strand
Strand 2
A
703 708anti-parallel
Strand 3
A
713 718anti-parallel
Strand 4
A
734 738anti-parallel
Strand 5
A
727 731anti-parallel
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There are 6 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
499 502first strand
Strand 2
A
649 654parallel
Strand 3
A
657 666anti-parallel
Strand 4
A
694 698anti-parallel
Strand 5
A
683 687anti-parallel
Strand 6
A
675 677anti-parallel
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There are 6 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
526 536first strand
Strand 2
A
510 523anti-parallel
Strand 3
A
548 559parallel
Strand 4
A
613 630parallel
Strand 5
A
583 591anti-parallel
Strand 6
A
541 543anti-parallel
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There are 6 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
526 536first strand
Strand 2
A
510 523anti-parallel
Strand 3
A
548 559parallel
Strand 4
A
613 630parallel
Strand 5
A
599 607anti-parallel
Strand 6
A
564 570anti-parallel
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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
749 750first strand
Strand 2
A
754 756anti-parallel
Strand 3
A
762 764anti-parallel
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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
780 798first strand
Strand 2
A
1150 1168anti-parallel
Strand 3
A
1138 1147anti-parallel
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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
804 806first strand
Strand 2
A
938 940anti-parallel
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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1220 1223first strand
Strand 2
A
1178 1182anti-parallel
Strand 3
A
1172 1174anti-parallel
Strand 4
A
1231 1233parallel
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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1187 1190first strand
Strand 2
A
1203 1206anti-parallel
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