Analysis of interatomic Contacts of Structural Units in PDB entry:
9XSM


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9XSM entry

There are 2 chains in PDB entry 9XSM (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
C
 MET 1GLY 572
D
 ARG 5GLU 586
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 65 helices in PDB entry 9XSM. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
C
1 9Right-handed 310
Helix 2
AA2
C
10 14Right-handed 310
Helix 3
AA3
C
19 50Right-handed alpha
Helix 4
AA4
C
51 55Right-handed 310
Helix 5
AA5
C
60 63Right-handed 310
Helix 6
AA6
C
64 69Right-handed alpha
Helix 7
AA7
C
77 104Right-handed alpha
Helix 8
AA8
C
122 129Right-handed alpha
Helix 9
AA9
C
138 147Right-handed alpha
Helix 10
AB1
C
147 159Right-handed alpha
Helix 11
AB2
C
160 164Right-handed 310
Helix 12
AB3
C
165 170Right-handed alpha
Helix 13
AB4
C
177 182Right-handed alpha
Helix 14
AB5
C
186 209Right-handed alpha
Helix 15
AB6
C
209 215Right-handed alpha
Helix 16
AB7
C
220 237Right-handed alpha
Helix 17
AB8
C
247 267Right-handed alpha
Helix 18
AB9
C
277 279Right-handed 310
Helix 19
AC1
C
280 289Right-handed alpha
Helix 20
AC2
C
295 300Right-handed 310
Helix 21
AC3
C
301 318Right-handed alpha
Helix 22
AC4
C
379 385Right-handed alpha
Helix 23
AC5
C
403 407Right-handed 310
Helix 24
AC6
C
408 414Right-handed alpha
Helix 25
AC7
C
429 435Right-handed alpha
Helix 26
AC8
C
444 453Right-handed alpha
Helix 27
AC9
C
479 492Right-handed alpha
Helix 28
AD1
C
506 521Right-handed alpha
Helix 29
AD2
C
556 561Right-handed alpha
Helix 30
AD3
C
564 569Right-handed alpha
Helix 31
AD4
D
6 17Right-handed alpha
Helix 32
AD5
D
20 25Right-handed alpha
Helix 33
AD6
D
28 33Right-handed alpha
Helix 34
AD7
D
36 55Right-handed alpha
Helix 35
AD8
D
58 62Right-handed 310
Helix 36
AD9
D
63 83Right-handed alpha
Helix 37
AE1
D
87 108Right-handed alpha
Helix 38
AE2
D
109 115Right-handed alpha
Helix 39
AE3
D
116 117Right-handed 310
Helix 40
AE4
D
118 122Right-handed 310
Helix 41
AE5
D
130 132Right-handed 310
Helix 42
AE6
D
133 140Right-handed alpha
Helix 43
AE7
D
140 147Right-handed alpha
Helix 44
AE8
D
149 159Right-handed alpha
Helix 45
AE9
D
163 171Right-handed alpha
Helix 46
AF1
D
175 185Right-handed alpha
Helix 47
AF2
D
189 194Right-handed alpha
Helix 48
AF3
D
195 200Right-handed alpha
Helix 49
AF4
D
203 211Right-handed alpha
Helix 50
AF5
D
212 217Right-handed alpha
Helix 51
AF6
D
224 229Right-handed alpha
Helix 52
AF7
D
232 247Right-handed alpha
Helix 53
AF8
D
253 272Right-handed alpha
Helix 54
AF9
D
287 301Right-handed alpha
Helix 55
AG1
D
301 310Right-handed alpha
Helix 56
AG2
D
311 321Right-handed alpha
Helix 57
AG3
D
322 330Right-handed alpha
Helix 58
AG4
D
390 398Right-handed alpha
Helix 59
AG5
D
407 411Right-handed 310
Helix 60
AG6
D
451 456Right-handed alpha
Helix 61
AG7
D
464 468Right-handed 310
Helix 62
AG8
D
487 500Right-handed alpha
Helix 63
AG9
D
517 519Right-handed 310
Helix 64
AH1
D
520 529Right-handed alpha
Helix 65
AH2
D
530 533Right-handed 310
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There are 5 sheets in PDB entry 9XSM. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
362 363first strand
Strand 2
C
339 341anti-parallel
Strand 3
C
397 399anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
528 529first strand
Strand 2
C
370 371parallel
Strand 3
C
542 546parallel
Strand 4
C
549 553anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
357 358first strand
Strand 2
D
401 402anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
379 380first strand
Strand 2
D
552 553parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
507 509first strand
Strand 2
D
537 539parallel
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