Analysis of interatomic Contacts of Structural Units in PDB entry:
9XTI

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9XTI entry

There are 4 chains in PDB entry 9XTI (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLY 3219	ILE 4760
D	MET 1	LYS 149
B	GLY 3219	ILE 4760
F	MET 1	LYS 149

There are169 helices in PDB entry 9XTI. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	3220	3247	Right-handed alpha
Helix 2	AA2	A	3265	3297	Right-handed alpha
Helix 3	AA3	A	3298	3311	Right-handed alpha
Helix 4	AA4	A	3315	3329	Right-handed alpha
Helix 5	AA5	A	3330	3341	Right-handed alpha
Helix 6	AA6	A	3379	3403	Right-handed alpha
Helix 7	AA7	A	3404	3417	Right-handed alpha
Helix 8	AA8	A	3422	3439	Right-handed alpha
Helix 9	AA9	A	3440	3455	Right-handed alpha
Helix 10	AB1	A	3456	3464	Right-handed 310
Helix 11	AB2	A	3465	3479	Right-handed alpha
Helix 12	AB3	A	3482	3506	Right-handed alpha
Helix 13	AB4	A	3509	3518	Right-handed alpha
Helix 14	AB5	A	3601	3606	Right-handed 310
Helix 15	AB6	A	3608	3612	Right-handed 310
Helix 16	AB7	A	3651	3654	Right-handed 310
Helix 17	AB8	A	3728	3755	Right-handed alpha
Helix 18	AB9	A	3756	3768	Right-handed alpha
Helix 19	AC1	A	3788	3792	Right-handed 310
Helix 20	AC2	A	3793	3804	Right-handed alpha
Helix 21	AC3	A	3805	3844	Right-handed alpha
Helix 22	AC4	A	3852	3859	Right-handed alpha
Helix 23	AC5	A	3872	3891	Right-handed alpha
Helix 24	AC6	A	3893	3902	Right-handed alpha
Helix 25	AC7	A	3904	3912	Right-handed alpha
Helix 26	AC8	A	3918	3933	Right-handed alpha
Helix 27	AC9	A	3936	3957	Right-handed alpha
Helix 28	AD1	A	3963	3981	Right-handed alpha
Helix 29	AD2	A	3985	4001	Right-handed alpha
Helix 30	AD3	A	4005	4012	Right-handed alpha
Helix 31	AD4	A	4012	4025	Right-handed alpha
Helix 32	AD5	A	4039	4043	Right-handed 310
Helix 33	AD6	A	4055	4060	Right-handed alpha
Helix 34	AD7	A	4061	4062	Right-handed 310
Helix 35	AD8	A	4063	4066	Right-handed 310
Helix 36	AD9	A	4067	4074	Right-handed alpha
Helix 37	AE1	A	4088	4113	Right-handed alpha
Helix 38	AE2	A	4128	4134	Right-handed alpha
Helix 39	AE3	A	4138	4153	Right-handed alpha
Helix 40	AE4	A	4155	4168	Right-handed alpha
Helix 41	AE5	A	4169	4171	Right-handed 310
Helix 42	AE6	A	4172	4177	Right-handed alpha
Helix 43	AE7	A	4180	4191	Right-handed alpha
Helix 44	AE8	A	4193	4203	Right-handed alpha
Helix 45	AE9	A	4204	4226	Right-handed alpha
Helix 46	AF1	A	4235	4251	Right-handed alpha
Helix 47	AF2	A	4251	4276	Right-handed alpha
Helix 48	AF3	A	4281	4300	Right-handed alpha
Helix 49	AF4	A	4302	4318	Right-handed alpha
Helix 50	AF5	A	4327	4340	Right-handed alpha
Helix 51	AF6	A	4357	4360	Right-handed 310
Helix 52	AF7	A	4382	4394	Right-handed alpha
Helix 53	AF8	A	4396	4400	Right-handed 310
Helix 54	AF9	A	4420	4428	Right-handed alpha
Helix 55	AG1	A	4429	4434	Right-handed alpha
Helix 56	AG2	A	4468	4473	Right-handed alpha
Helix 57	AG3	A	4474	4482	Right-handed alpha
Helix 58	AG4	A	4483	4495	Right-handed alpha
Helix 59	AG5	A	4497	4516	Right-handed alpha
Helix 60	AG6	A	4518	4527	Right-handed alpha
Helix 61	AG7	A	4531	4550	Right-handed alpha
Helix 62	AG8	A	4554	4576	Right-handed alpha
Helix 63	AG9	A	4590	4603	Right-handed alpha
Helix 64	AH1	A	4603	4609	Right-handed alpha
Helix 65	AH2	A	4609	4625	Right-handed alpha
Helix 66	AH3	A	4627	4639	Right-handed alpha
Helix 67	AH4	A	4640	4642	Right-handed 310
Helix 68	AH5	A	4643	4650	Right-handed alpha
Helix 69	AH6	A	4652	4668	Right-handed alpha
Helix 70	AH7	A	4672	4685	Right-handed alpha
Helix 71	AH8	A	4686	4699	Right-handed alpha
Helix 72	AH9	A	4707	4715	Right-handed alpha
Helix 73	AI1	A	4717	4731	Right-handed alpha
Helix 74	AI2	A	4733	4744	Right-handed alpha
Helix 75	AI3	A	4744	4753	Right-handed alpha
Helix 76	AI4	D	1	5	Right-handed 310
Helix 77	AI5	D	6	21	Right-handed alpha
Helix 78	AI6	D	32	40	Right-handed alpha
Helix 79	AI7	D	45	57	Right-handed alpha
Helix 80	AI8	D	66	78	Right-handed alpha
Helix 81	AI9	D	82	94	Right-handed alpha
Helix 82	AJ1	D	102	114	Right-handed alpha
Helix 83	AJ2	D	118	130	Right-handed alpha
Helix 84	AJ3	D	138	148	Right-handed alpha
Helix 85	AJ4	B	3220	3247	Right-handed alpha
Helix 86	AJ5	B	3265	3297	Right-handed alpha
Helix 87	AJ6	B	3298	3311	Right-handed alpha
Helix 88	AJ7	B	3315	3329	Right-handed alpha
Helix 89	AJ8	B	3330	3343	Right-handed alpha
Helix 90	AJ9	B	3379	3403	Right-handed alpha
Helix 91	AK1	B	3404	3417	Right-handed alpha
Helix 92	AK2	B	3422	3439	Right-handed alpha
Helix 93	AK3	B	3440	3455	Right-handed alpha
Helix 94	AK4	B	3456	3464	Right-handed 310
Helix 95	AK5	B	3465	3479	Right-handed alpha
Helix 96	AK6	B	3482	3506	Right-handed alpha
Helix 97	AK7	B	3509	3518	Right-handed alpha
Helix 98	AK8	B	3601	3606	Right-handed 310
Helix 99	AK9	B	3608	3612	Right-handed 310
Helix 100	AL1	B	3651	3654	Right-handed 310
Helix 101	AL2	B	3728	3755	Right-handed alpha
Helix 102	AL3	B	3756	3769	Right-handed alpha
Helix 103	AL4	B	3788	3792	Right-handed 310
Helix 104	AL5	B	3793	3804	Right-handed alpha
Helix 105	AL6	B	3805	3844	Right-handed alpha
Helix 106	AL7	B	3852	3859	Right-handed alpha
Helix 107	AL8	B	3872	3891	Right-handed alpha
Helix 108	AL9	B	3893	3902	Right-handed alpha
Helix 109	AM1	B	3904	3912	Right-handed alpha
Helix 110	AM2	B	3918	3933	Right-handed alpha
Helix 111	AM3	B	3936	3957	Right-handed alpha
Helix 112	AM4	B	3964	3981	Right-handed alpha
Helix 113	AM5	B	3985	4001	Right-handed alpha
Helix 114	AM6	B	4006	4012	Right-handed alpha
Helix 115	AM7	B	4012	4025	Right-handed alpha
Helix 116	AM8	B	4038	4043	Right-handed 310
Helix 117	AM9	B	4055	4060	Right-handed alpha
Helix 118	AN1	B	4061	4062	Right-handed 310
Helix 119	AN2	B	4063	4066	Right-handed 310
Helix 120	AN3	B	4067	4074	Right-handed alpha
Helix 121	AN4	B	4088	4112	Right-handed alpha
Helix 122	AN5	B	4128	4134	Right-handed alpha
Helix 123	AN6	B	4138	4153	Right-handed alpha
Helix 124	AN7	B	4155	4168	Right-handed alpha
Helix 125	AN8	B	4169	4171	Right-handed 310
Helix 126	AN9	B	4172	4177	Right-handed alpha
Helix 127	AO1	B	4180	4192	Right-handed alpha
Helix 128	AO2	B	4193	4203	Right-handed alpha
Helix 129	AO3	B	4204	4227	Right-handed alpha
Helix 130	AO4	B	4235	4250	Right-handed alpha
Helix 131	AO5	B	4251	4275	Right-handed alpha
Helix 132	AO6	B	4281	4299	Right-handed alpha
Helix 133	AO7	B	4302	4316	Right-handed alpha
Helix 134	AO8	B	4327	4340	Right-handed alpha
Helix 135	AO9	B	4357	4360	Right-handed 310
Helix 136	AP1	B	4382	4394	Right-handed alpha
Helix 137	AP2	B	4396	4400	Right-handed 310
Helix 138	AP3	B	4420	4428	Right-handed alpha
Helix 139	AP4	B	4429	4434	Right-handed alpha
Helix 140	AP5	B	4468	4473	Right-handed alpha
Helix 141	AP6	B	4475	4482	Right-handed alpha
Helix 142	AP7	B	4483	4495	Right-handed alpha
Helix 143	AP8	B	4497	4516	Right-handed alpha
Helix 144	AP9	B	4518	4527	Right-handed alpha
Helix 145	AQ1	B	4528	4530	Right-handed 310
Helix 146	AQ2	B	4531	4550	Right-handed alpha
Helix 147	AQ3	B	4554	4576	Right-handed alpha
Helix 148	AQ4	B	4590	4600	Right-handed alpha
Helix 149	AQ5	B	4603	4609	Right-handed alpha
Helix 150	AQ6	B	4609	4625	Right-handed alpha
Helix 151	AQ7	B	4627	4639	Right-handed alpha
Helix 152	AQ8	B	4640	4642	Right-handed 310
Helix 153	AQ9	B	4643	4650	Right-handed alpha
Helix 154	AR1	B	4652	4668	Right-handed alpha
Helix 155	AR2	B	4672	4685	Right-handed alpha
Helix 156	AR3	B	4686	4699	Right-handed alpha
Helix 157	AR4	B	4707	4715	Right-handed alpha
Helix 158	AR5	B	4717	4731	Right-handed alpha
Helix 159	AR6	B	4733	4744	Right-handed alpha
Helix 160	AR7	B	4744	4753	Right-handed alpha
Helix 161	AR8	F	1	5	Right-handed 310
Helix 162	AR9	F	6	21	Right-handed alpha
Helix 163	AS1	F	32	40	Right-handed alpha
Helix 164	AS2	F	45	57	Right-handed alpha
Helix 165	AS3	F	66	78	Right-handed alpha
Helix 166	AS4	F	82	94	Right-handed alpha
Helix 167	AS5	F	102	114	Right-handed alpha
Helix 168	AS6	F	118	130	Right-handed alpha
Helix 169	AS7	F	138	148	Right-handed alpha

There are 14 sheets in PDB entry 9XTI. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	3250	3252	first strand
Strand 2	A	3255	3257	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	3543	3546	first strand
Strand 2	A	3710	3720	anti-parallel
Strand 3	A	3560	3579	anti-parallel
Strand 4	A	3551	3556	anti-parallel

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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	3543	3546	first strand
Strand 2	A	3710	3720	anti-parallel
Strand 3	A	3560	3579	anti-parallel
Strand 4	A	3626	3649	anti-parallel
Strand 5	A	3585	3595	anti-parallel
Strand 6	A	3613	3619	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	3657	3659	first strand
Strand 2	A	3666	3668	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	4051	4052	first strand
Strand 2	A	4119	4120	anti-parallel

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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	4372	4373	first strand
Strand 2	A	4350	4355	anti-parallel
Strand 3	A	4438	4444	parallel
Strand 4	A	4406	4410	anti-parallel
Strand 5	A	4413	4415	anti-parallel
Strand 6	A	4455	4456	parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	27	29	first strand
Strand 2	D	63	65	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	3250	3252	first strand
Strand 2	B	3255	3257	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	3543	3546	first strand
Strand 2	B	3710	3719	anti-parallel
Strand 3	B	3560	3579	anti-parallel
Strand 4	B	3551	3556	anti-parallel

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There are 6 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	3543	3546	first strand
Strand 2	B	3710	3719	anti-parallel
Strand 3	B	3560	3579	anti-parallel
Strand 4	B	3626	3649	anti-parallel
Strand 5	B	3585	3595	anti-parallel
Strand 6	B	3613	3619	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	3657	3659	first strand
Strand 2	B	3666	3668	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	4051	4052	first strand
Strand 2	B	4119	4120	anti-parallel

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There are 6 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	4372	4373	first strand
Strand 2	B	4350	4355	anti-parallel
Strand 3	B	4438	4444	parallel
Strand 4	B	4406	4410	anti-parallel
Strand 5	B	4413	4415	anti-parallel
Strand 6	B	4455	4456	parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	27	29	first strand
Strand 2	F	63	65	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9XTI

Analysis of interatomic Contacts of Structural Units in PDB entry:
9XTI