Analysis of interatomic Contacts of Structural Units in PDB entry:
9XUO


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9XUO entry

There are 2 chains in PDB entry 9XUO (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
C
 MET 1LEU 573
D
 ASN 2ILE 588
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 62 helices in PDB entry 9XUO. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
C
4 9Right-handed alpha
Helix 2
AA2
C
10 13Right-handed 310
Helix 3
AA3
C
19 31Right-handed alpha
Helix 4
AA4
C
33 50Right-handed alpha
Helix 5
AA5
C
70 79Right-handed alpha
Helix 6
AA6
C
79 87Right-handed alpha
Helix 7
AA7
C
87 92Right-handed alpha
Helix 8
AA8
C
92 104Right-handed alpha
Helix 9
AA9
C
122 130Right-handed alpha
Helix 10
AB1
C
139 156Right-handed alpha
Helix 11
AB2
C
159 166Right-handed alpha
Helix 12
AB3
C
168 177Right-handed alpha
Helix 13
AB4
C
177 185Right-handed alpha
Helix 14
AB5
C
186 209Right-handed alpha
Helix 15
AB6
C
211 216Right-handed alpha
Helix 16
AB7
C
220 236Right-handed alpha
Helix 17
AB8
C
237 266Right-handed alpha
Helix 18
AB9
C
267 269Right-handed 310
Helix 19
AC1
C
278 290Right-handed alpha
Helix 20
AC2
C
294 299Right-handed alpha
Helix 21
AC3
C
302 316Right-handed alpha
Helix 22
AC4
C
382 387Right-handed alpha
Helix 23
AC5
C
408 413Right-handed alpha
Helix 24
AC6
C
430 436Right-handed alpha
Helix 25
AC7
C
442 452Right-handed alpha
Helix 26
AC8
C
476 492Right-handed alpha
Helix 27
AC9
C
512 521Right-handed alpha
Helix 28
AD1
C
556 560Right-handed 310
Helix 29
AD2
C
565 569Right-handed 310
Helix 30
AD3
D
5 17Right-handed alpha
Helix 31
AD4
D
20 43Right-handed alpha
Helix 32
AD5
D
48 56Right-handed alpha
Helix 33
AD6
D
58 61Right-handed 310
Helix 34
AD7
D
62 73Right-handed alpha
Helix 35
AD8
D
74 102Right-handed alpha
Helix 36
AD9
D
113 117Right-handed 310
Helix 37
AE1
D
118 132Right-handed alpha
Helix 38
AE2
D
134 147Right-handed alpha
Helix 39
AE3
D
149 157Right-handed alpha
Helix 40
AE4
D
163 172Right-handed alpha
Helix 41
AE5
D
175 183Right-handed alpha
Helix 42
AE6
D
187 211Right-handed alpha
Helix 43
AE7
D
211 217Right-handed alpha
Helix 44
AE8
D
225 231Right-handed alpha
Helix 45
AE9
D
235 247Right-handed alpha
Helix 46
AF1
D
247 274Right-handed alpha
Helix 47
AF2
D
286 295Right-handed alpha
Helix 48
AF3
D
296 302Right-handed alpha
Helix 49
AF4
D
303 307Right-handed 310
Helix 50
AF5
D
311 329Right-handed alpha
Helix 51
AF6
D
388 390Right-handed 310
Helix 52
AF7
D
391 398Right-handed alpha
Helix 53
AF8
D
412 416Right-handed 310
Helix 54
AF9
D
417 422Right-handed alpha
Helix 55
AG1
D
438 443Right-handed alpha
Helix 56
AG2
D
451 462Right-handed alpha
Helix 57
AG3
D
463 467Right-handed 310
Helix 58
AG4
D
490 500Right-handed alpha
Helix 59
AG5
D
517 532Right-handed alpha
Helix 60
AG6
D
543 547Right-handed 310
Helix 61
AG7
D
566 571Right-handed alpha
Helix 62
AG8
D
575 585Right-handed alpha
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There are 6 sheets in PDB entry 9XUO. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
339 340first strand
Strand 2
C
398 399anti-parallel
Strand 3
C
402 403anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
371 372first strand
Strand 2
C
543 544parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
428 429first strand
Strand 2
C
467 468anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
366 369first strand
Strand 2
D
350 357anti-parallel
Strand 3
D
372 373anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
366 369first strand
Strand 2
D
350 357anti-parallel
Strand 3
D
402 407anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
382 383first strand
Strand 2
D
555 557parallel
Strand 3
D
560 561anti-parallel
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