Analysis of interatomic Contacts of Structural Units in PDB entry:
9XVH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9XVH entry

There are 4 chains in PDB entry 9XVH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 1ASP 186
B
 ALA 1ASP 186
C
 ALA 1ASP 186
D
 ALA 1ASP 186
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 29 helices in PDB entry 9XVH. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
22 39Right-handed alpha
Helix 2
AA2
A
42 45Right-handed 310
Helix 3
AA3
A
64 79Right-handed alpha
Helix 4
AA4
A
80 83Right-handed 310
Helix 5
AA5
A
133 143Right-handed alpha
Helix 6
AA6
A
167 178Right-handed alpha
Helix 7
AA7
A
181 185Right-handed 310
Helix 8
AA8
B
22 39Right-handed alpha
Helix 9
AA9
B
42 45Right-handed 310
Helix 10
AB1
B
64 77Right-handed alpha
Helix 11
AB2
B
98 102Right-handed 310
Helix 12
AB3
B
133 143Right-handed alpha
Helix 13
AB4
B
167 178Right-handed alpha
Helix 14
AB5
B
181 185Right-handed 310
Helix 15
AB6
C
22 39Right-handed alpha
Helix 16
AB7
C
42 45Right-handed 310
Helix 17
AB8
C
64 79Right-handed alpha
Helix 18
AB9
C
80 83Right-handed 310
Helix 19
AC1
C
98 102Right-handed 310
Helix 20
AC2
C
133 143Right-handed alpha
Helix 21
AC3
C
167 178Right-handed alpha
Helix 22
AC4
C
181 185Right-handed 310
Helix 23
AC5
D
22 39Right-handed alpha
Helix 24
AC6
D
42 45Right-handed 310
Helix 25
AC7
D
64 79Right-handed alpha
Helix 26
AC8
D
98 102Right-handed 310
Helix 27
AC9
D
133 143Right-handed alpha
Helix 28
AD1
D
167 178Right-handed alpha
Helix 29
AD2
D
181 185Right-handed 310
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There are 4 sheets in PDB entry 9XVH. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
47 55first strand
Strand 2
A
7 15parallel
Strand 3
A
89 94parallel
Strand 4
A
122 126parallel
Strand 5
A
104 106anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
47 55first strand
Strand 2
B
7 15parallel
Strand 3
B
89 94parallel
Strand 4
B
122 126parallel
Strand 5
B
104 106anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
47 55first strand
Strand 2
C
7 15parallel
Strand 3
C
89 94parallel
Strand 4
C
122 126parallel
Strand 5
C
104 106anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
47 55first strand
Strand 2
D
7 15parallel
Strand 3
D
89 94parallel
Strand 4
D
122 126parallel
Strand 5
D
104 106anti-parallel
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