Analysis of interatomic Contacts of Structural Units in PDB entry:
9XVR

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9XVR entry

There are 3 chains in PDB entry 9XVR (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
B	CYS 25	LEU 1194
A	CYS 25	LEU 1194
C	CYS 25	LEU 1194

There are 88 helices in PDB entry 9XVR. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	B	32	36	Right-handed 310
Helix 2	AA2	B	44	48	Right-handed 310
Helix 3	AA3	B	212	218	Right-handed alpha
Helix 4	AA4	B	331	341	Right-handed alpha
Helix 5	AA5	B	374	379	Right-handed 310
Helix 6	AA6	B	399	407	Right-handed alpha
Helix 7	AA7	B	418	424	Right-handed alpha
Helix 8	AA8	B	438	442	Right-handed 310
Helix 9	AA9	B	451	457	Right-handed alpha
Helix 10	AB1	B	513	522	Right-handed alpha
Helix 11	AB2	B	582	586	Right-handed 310
Helix 12	AB3	B	612	616	Right-handed 310
Helix 13	AB4	B	668	673	Right-handed alpha
Helix 14	AB5	B	677	687	Right-handed alpha
Helix 15	AB6	B	781	788	Right-handed alpha
Helix 16	AB7	B	790	797	Right-handed alpha
Helix 17	AB8	B	798	801	Right-handed 310
Helix 18	AB9	B	806	826	Right-handed alpha
Helix 19	AC1	B	864	874	Right-handed alpha
Helix 20	AC2	B	883	892	Right-handed alpha
Helix 21	AC3	B	902	907	Right-handed alpha
Helix 22	AC4	B	916	931	Right-handed alpha
Helix 23	AC5	B	947	958	Right-handed alpha
Helix 24	AC6	B	962	969	Right-handed alpha
Helix 25	AC7	B	969	981	Right-handed alpha
Helix 26	AC8	B	992	1014	Right-handed alpha
Helix 27	AC9	B	1015	1017	Right-handed 310
Helix 28	AD1	B	1026	1034	Right-handed alpha
Helix 29	AD2	B	1035	1078	Right-handed alpha
Helix 30	AD3	A	32	36	Right-handed 310
Helix 31	AD4	A	44	48	Right-handed 310
Helix 32	AD5	A	212	218	Right-handed alpha
Helix 33	AD6	A	331	341	Right-handed alpha
Helix 34	AD7	A	374	379	Right-handed 310
Helix 35	AD8	A	399	407	Right-handed alpha
Helix 36	AD9	A	418	424	Right-handed alpha
Helix 37	AE1	A	438	442	Right-handed 310
Helix 38	AE2	A	452	457	Right-handed alpha
Helix 39	AE3	A	513	522	Right-handed alpha
Helix 40	AE4	A	582	586	Right-handed 310
Helix 41	AE5	A	612	616	Right-handed 310
Helix 42	AE6	A	667	673	Right-handed alpha
Helix 43	AE7	A	677	687	Right-handed alpha
Helix 44	AE8	A	781	788	Right-handed alpha
Helix 45	AE9	A	790	797	Right-handed alpha
Helix 46	AF1	A	798	801	Right-handed 310
Helix 47	AF2	A	806	826	Right-handed alpha
Helix 48	AF3	A	864	874	Right-handed alpha
Helix 49	AF4	A	883	892	Right-handed alpha
Helix 50	AF5	A	902	907	Right-handed alpha
Helix 51	AF6	A	916	931	Right-handed alpha
Helix 52	AF7	A	947	958	Right-handed alpha
Helix 53	AF8	A	962	969	Right-handed alpha
Helix 54	AF9	A	969	981	Right-handed alpha
Helix 55	AG1	A	992	1014	Right-handed alpha
Helix 56	AG2	A	1015	1017	Right-handed 310
Helix 57	AG3	A	1026	1034	Right-handed alpha
Helix 58	AG4	A	1035	1078	Right-handed alpha
Helix 59	AG5	A	1170	1172	Right-handed 310
Helix 60	AG6	C	32	36	Right-handed 310
Helix 61	AG7	C	44	48	Right-handed 310
Helix 62	AG8	C	212	218	Right-handed alpha
Helix 63	AG9	C	331	341	Right-handed alpha
Helix 64	AH1	C	374	379	Right-handed 310
Helix 65	AH2	C	399	407	Right-handed alpha
Helix 66	AH3	C	418	424	Right-handed alpha
Helix 67	AH4	C	438	445	Right-handed 310
Helix 68	AH5	C	452	457	Right-handed alpha
Helix 69	AH6	C	513	522	Right-handed alpha
Helix 70	AH7	C	612	616	Right-handed 310
Helix 71	AH8	C	668	673	Right-handed alpha
Helix 72	AH9	C	677	687	Right-handed alpha
Helix 73	AI1	C	781	788	Right-handed alpha
Helix 74	AI2	C	790	797	Right-handed alpha
Helix 75	AI3	C	798	801	Right-handed 310
Helix 76	AI4	C	806	826	Right-handed alpha
Helix 77	AI5	C	864	874	Right-handed alpha
Helix 78	AI6	C	883	892	Right-handed alpha
Helix 79	AI7	C	902	907	Right-handed alpha
Helix 80	AI8	C	916	931	Right-handed alpha
Helix 81	AI9	C	947	959	Right-handed alpha
Helix 82	AJ1	C	962	969	Right-handed alpha
Helix 83	AJ2	C	969	981	Right-handed alpha
Helix 84	AJ3	C	992	1014	Right-handed alpha
Helix 85	AJ4	C	1015	1017	Right-handed 310
Helix 86	AJ5	C	1026	1034	Right-handed alpha
Helix 87	AJ6	C	1035	1078	Right-handed alpha
Helix 88	AJ7	C	1170	1172	Right-handed 310

There are 61 sheets in PDB entry 9XVR. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8, AE9, AF1, AF2, AF3, AF4, AF5, AF6, AF7, AF8, AF9, AG1, AG2, AG3, AG4, AG5, AG6, AG7,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	29	30	first strand
Strand 2	B	91	92	parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	63	70	first strand
Strand 2	B	308	316	anti-parallel
Strand 3	B	322	324	anti-parallel

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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	78	80	first strand
Strand 2	B	302	306	anti-parallel
Strand 3	B	106	110	anti-parallel
Strand 4	B	241	247	anti-parallel
Strand 5	B	252	256	anti-parallel
Strand 6	B	267	272	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	83	84	first strand
Strand 2	B	286	289	parallel
Strand 3	B	199	202	parallel

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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	100	101	first strand
Strand 2	B	280	283	anti-parallel
Strand 3	B	139	147	anti-parallel
Strand 4	B	154	167	anti-parallel
Strand 5	B	172	176	anti-parallel
Strand 6	B	229	233	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	117	118	first strand
Strand 2	B	130	133	anti-parallel
Strand 3	B	298	299	parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	179	182	first strand
Strand 2	B	221	224	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	348	351	first strand
Strand 2	B	646	651	anti-parallel
Strand 3	B	656	662	anti-parallel
Strand 4	B	696	699	anti-parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	361	365	first strand
Strand 2	B	591	595	parallel
Strand 3	B	598	602	anti-parallel

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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	389	393	first strand
Strand 2	B	429	436	anti-parallel
Strand 3	B	555	562	anti-parallel
Strand 4	B	466	470	anti-parallel
Strand 5	B	411	415	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	397	398	first strand
Strand 2	B	571	572	parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	490	494	first strand
Strand 2	B	537	544	anti-parallel
Strand 3	B	529	532	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	548	549	first strand
Strand 2	B	552	553	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	628	629	first strand
Strand 2	B	635	636	anti-parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	701	707	first strand
Strand 2	B	733	737	parallel
Strand 3	B	719	723	anti-parallel

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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	767	771	first strand
Strand 2	B	1109	1125	anti-parallel
Strand 3	B	1097	1106	anti-parallel

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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	767	771	first strand
Strand 2	B	1109	1125	anti-parallel
Strand 3	B	756	764	anti-parallel
Strand 4	A	943	944	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	778	780	first strand
Strand 2	B	908	910	anti-parallel

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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	943	944	first strand
Strand 2	C	756	764	anti-parallel
Strand 3	C	1109	1124	anti-parallel
Strand 4	C	767	771	anti-parallel

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There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	943	944	first strand
Strand 2	C	756	764	anti-parallel
Strand 3	C	1109	1124	anti-parallel
Strand 4	C	1097	1106	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1131	1132	first strand
Strand 2	B	1184	1185	parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1138	1141	first strand
Strand 2	B	1174	1177	anti-parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1144	1148	first strand
Strand 2	B	1156	1160	anti-parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	29	30	first strand
Strand 2	A	91	92	parallel

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There are 3 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	63	70	first strand
Strand 2	A	308	316	anti-parallel
Strand 3	A	322	324	anti-parallel

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There are 6 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	78	80	first strand
Strand 2	A	302	306	anti-parallel
Strand 3	A	106	110	anti-parallel
Strand 4	A	241	247	anti-parallel
Strand 5	A	252	256	anti-parallel
Strand 6	A	267	272	anti-parallel

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There are 3 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	83	84	first strand
Strand 2	A	286	289	parallel
Strand 3	A	199	202	parallel

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There are 6 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	100	101	first strand
Strand 2	A	280	283	anti-parallel
Strand 3	A	139	147	anti-parallel
Strand 4	A	154	167	anti-parallel
Strand 5	A	172	176	anti-parallel
Strand 6	A	229	233	anti-parallel

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There are 3 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	117	118	first strand
Strand 2	A	130	133	anti-parallel
Strand 3	A	298	299	parallel

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There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	179	182	first strand
Strand 2	A	221	224	anti-parallel

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There are 4 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	348	349	first strand
Strand 2	A	646	651	anti-parallel
Strand 3	A	656	662	anti-parallel
Strand 4	A	696	699	anti-parallel

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There are 3 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	362	365	first strand
Strand 2	A	591	595	parallel
Strand 3	A	598	602	anti-parallel

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There are 5 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	389	393	first strand
Strand 2	A	429	436	anti-parallel
Strand 3	A	555	562	anti-parallel
Strand 4	A	466	470	anti-parallel
Strand 5	A	411	415	anti-parallel

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There are 2 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	397	398	first strand
Strand 2	A	571	572	parallel

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There are 3 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	490	494	first strand
Strand 2	A	537	544	anti-parallel
Strand 3	A	529	532	anti-parallel

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There are 2 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	548	549	first strand
Strand 2	A	552	553	anti-parallel

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There are 2 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	628	629	first strand
Strand 2	A	635	636	anti-parallel

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There are 3 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	701	707	first strand
Strand 2	A	733	737	parallel
Strand 3	A	719	723	anti-parallel

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There are 3 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	767	771	first strand
Strand 2	A	1109	1124	anti-parallel
Strand 3	A	1097	1106	anti-parallel

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There are 4 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	767	771	first strand
Strand 2	A	1109	1124	anti-parallel
Strand 3	A	756	764	anti-parallel
Strand 4	C	943	944	anti-parallel

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There are 2 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	778	780	first strand
Strand 2	A	908	910	anti-parallel

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There are 2 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1131	1132	first strand
Strand 2	A	1184	1185	parallel

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There are 2 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1139	1141	first strand
Strand 2	A	1174	1176	anti-parallel

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There are 2 strands in AE8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1144	1148	first strand
Strand 2	A	1156	1160	anti-parallel

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There are 2 strands in AE9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	29	30	first strand
Strand 2	C	91	92	parallel

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There are 3 strands in AF1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	63	70	first strand
Strand 2	C	308	316	anti-parallel
Strand 3	C	322	324	anti-parallel

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There are 6 strands in AF2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	78	80	first strand
Strand 2	C	302	306	anti-parallel
Strand 3	C	106	110	anti-parallel
Strand 4	C	241	247	anti-parallel
Strand 5	C	252	256	anti-parallel
Strand 6	C	267	272	anti-parallel

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There are 3 strands in AF3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	83	84	first strand
Strand 2	C	286	289	parallel
Strand 3	C	199	202	parallel

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There are 6 strands in AF4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	100	101	first strand
Strand 2	C	280	283	anti-parallel
Strand 3	C	139	147	anti-parallel
Strand 4	C	154	167	anti-parallel
Strand 5	C	172	176	anti-parallel
Strand 6	C	229	233	anti-parallel

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There are 3 strands in AF5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	117	118	first strand
Strand 2	C	130	133	anti-parallel
Strand 3	C	298	299	parallel

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There are 2 strands in AF6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	179	182	first strand
Strand 2	C	221	224	anti-parallel

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There are 4 strands in AF7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	348	349	first strand
Strand 2	C	646	651	anti-parallel
Strand 3	C	656	662	anti-parallel
Strand 4	C	696	699	anti-parallel

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There are 3 strands in AF8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	362	365	first strand
Strand 2	C	591	595	parallel
Strand 3	C	598	602	anti-parallel

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There are 5 strands in AF9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	391	393	first strand
Strand 2	C	429	436	anti-parallel
Strand 3	C	555	562	anti-parallel
Strand 4	C	466	470	anti-parallel
Strand 5	C	411	415	anti-parallel

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There are 2 strands in AG1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	397	398	first strand
Strand 2	C	571	572	parallel

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There are 3 strands in AG2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	490	494	first strand
Strand 2	C	537	544	anti-parallel
Strand 3	C	529	532	anti-parallel

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There are 2 strands in AG3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	628	629	first strand
Strand 2	C	635	636	anti-parallel

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There are 3 strands in AG4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	701	707	first strand
Strand 2	C	733	737	parallel
Strand 3	C	719	723	anti-parallel

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There are 2 strands in AG5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	778	780	first strand
Strand 2	C	908	910	anti-parallel

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There are 4 strands in AG6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1174	1176	first strand
Strand 2	C	1138	1141	anti-parallel
Strand 3	C	1130	1132	anti-parallel
Strand 4	C	1184	1185	parallel

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There are 2 strands in AG7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1144	1148	first strand
Strand 2	C	1156	1160	anti-parallel

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Analysis of interatomic Contacts of Structural Units in PDB entry: 9XVR

Analysis of interatomic Contacts of Structural Units in PDB entry:
9XVR