Analysis of interatomic Contacts of Structural Units in PDB entry:
9XW5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9XW5 entry

There are 2 chains in PDB entry 9XW5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 17GLY 1050
B
 ASN 323ASP 605
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 52 helices in PDB entry 9XW5. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
41 53Right-handed alpha
Helix 2
AA2
A
54 56Right-handed 310
Helix 3
AA3
A
58 62Right-handed 310
Helix 4
AA4
A
64 68Right-handed 310
Helix 5
AA5
A
108 122Right-handed alpha
Helix 6
AA6
A
125 131Right-handed alpha
Helix 7
AA7
A
133 143Right-handed alpha
Helix 8
AA8
A
143 155Right-handed alpha
Helix 9
AA9
A
159 167Right-handed alpha
Helix 10
AB1
A
180 189Right-handed 310
Helix 11
AB2
A
216 227Right-handed alpha
Helix 12
AB3
A
266 269Right-handed 310
Helix 13
AB4
A
270 279Right-handed alpha
Helix 14
AB5
A
290 297Right-handed alpha
Helix 15
AB6
A
305 310Right-handed 310
Helix 16
AB7
A
394 396Right-handed 310
Helix 17
AB8
A
489 496Right-handed alpha
Helix 18
AB9
A
527 537Right-handed alpha
Helix 19
AC1
A
544 554Right-handed alpha
Helix 20
AC2
A
556 563Right-handed 310
Helix 21
AC3
A
564 570Right-handed alpha
Helix 22
AC4
A
576 588Right-handed alpha
Helix 23
AC5
A
608 623Right-handed alpha
Helix 24
AC6
A
624 638Right-handed alpha
Helix 25
AC7
A
639 641Right-handed 310
Helix 26
AC8
A
648 658Right-handed alpha
Helix 27
AC9
A
660 672Right-handed alpha
Helix 28
AD1
A
673 675Right-handed 310
Helix 29
AD2
A
680 694Right-handed alpha
Helix 30
AD3
A
697 721Right-handed alpha
Helix 31
AD4
A
727 740Right-handed alpha
Helix 32
AD5
A
741 748Right-handed alpha
Helix 33
AD6
A
809 827Right-handed alpha
Helix 34
AD7
A
857 861Right-handed alpha
Helix 35
AD8
A
873 885Right-handed alpha
Helix 36
AD9
A
888 912Right-handed alpha
Helix 37
AE1
A
917 919Right-handed 310
Helix 38
AE2
A
957 965Right-handed alpha
Helix 39
AE3
A
974 994Right-handed alpha
Helix 40
AE4
A
994 1005Right-handed alpha
Helix 41
AE5
A
1006 1009Right-handed 310
Helix 42
AE6
A
1016 1020Right-handed 310
Helix 43
AE7
A
1021 1026Right-handed alpha
Helix 44
AE8
A
1027 1029Right-handed 310
Helix 45
AE9
A
1030 1048Right-handed alpha
Helix 46
AF1
B
339 348Right-handed alpha
Helix 47
AF2
B
400 411Right-handed alpha
Helix 48
AF3
B
431 437Right-handed alpha
Helix 49
AF4
B
441 511Right-handed alpha
Helix 50
AF5
B
519 530Right-handed alpha
Helix 51
AF6
B
531 586Right-handed alpha
Helix 52
AF7
B
591 599Right-handed alpha
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There are 10 sheets in PDB entry 9XW5. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
22 24first strand
Strand 2
A
32 34anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
69 71first strand
Strand 2
A
100 102anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
193 195first strand
Strand 2
A
284 289parallel
Strand 3
A
250 254anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
325 326first strand
Strand 2
A
484 485parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
385 392first strand
Strand 2
A
333 341anti-parallel
Strand 3
A
472 475anti-parallel
Strand 4
A
441 444anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
372 373first strand
Strand 2
A
353 360anti-parallel
Strand 3
A
402 409anti-parallel
Strand 4
A
421 423anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
752 753first strand
Strand 2
A
756 760anti-parallel
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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
770 771first strand
Strand 2
A
779 784anti-parallel
Strand 3
A
796 803anti-parallel
Strand 4
A
845 849anti-parallel
Strand 5
A
838 842anti-parallel
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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
854 856first strand
Strand 2
A
921 924anti-parallel
Strand 3
A
929 931anti-parallel
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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
334 335first strand
Strand 2
B
355 359parallel
Strand 3
B
368 372anti-parallel
Strand 4
B
379 386anti-parallel
Strand 5
B
389 391anti-parallel
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