Analysis of interatomic Contacts of Structural Units in PDB entry:
9XW8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9XW8 entry

There is 1 chain in PDB entry 9XW8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 109GLY 1050
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 37 helices in PDB entry 9XW8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
109 122Right-handed alpha
Helix 2
AA2
A
124 130Right-handed alpha
Helix 3
AA3
A
133 143Right-handed alpha
Helix 4
AA4
A
143 154Right-handed alpha
Helix 5
AA5
A
160 167Right-handed alpha
Helix 6
AA6
A
181 185Right-handed 310
Helix 7
AA7
A
216 227Right-handed alpha
Helix 8
AA8
A
266 269Right-handed 310
Helix 9
AA9
A
270 280Right-handed alpha
Helix 10
AB1
A
290 295Right-handed alpha
Helix 11
AB2
A
305 309Right-handed 310
Helix 12
AB3
A
394 396Right-handed 310
Helix 13
AB4
A
488 496Right-handed alpha
Helix 14
AB5
A
528 537Right-handed alpha
Helix 15
AB6
A
544 554Right-handed alpha
Helix 16
AB7
A
561 563Right-handed 310
Helix 17
AB8
A
564 571Right-handed alpha
Helix 18
AB9
A
577 589Right-handed alpha
Helix 19
AC1
A
608 623Right-handed alpha
Helix 20
AC2
A
624 631Right-handed alpha
Helix 21
AC3
A
631 638Right-handed alpha
Helix 22
AC4
A
647 659Right-handed alpha
Helix 23
AC5
A
662 672Right-handed alpha
Helix 24
AC6
A
677 694Right-handed alpha
Helix 25
AC7
A
697 722Right-handed alpha
Helix 26
AC8
A
727 740Right-handed alpha
Helix 27
AC9
A
741 748Right-handed alpha
Helix 28
AD1
A
809 828Right-handed alpha
Helix 29
AD2
A
856 863Right-handed alpha
Helix 30
AD3
A
875 885Right-handed alpha
Helix 31
AD4
A
888 911Right-handed alpha
Helix 32
AD5
A
917 919Right-handed 310
Helix 33
AD6
A
957 965Right-handed alpha
Helix 34
AD7
A
974 993Right-handed alpha
Helix 35
AD8
A
994 1001Right-handed alpha
Helix 36
AD9
A
1020 1027Right-handed alpha
Helix 37
AE1
A
1031 1044Right-handed alpha
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There are 6 sheets in PDB entry 9XW8. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
189 192first strand
Strand 2
A
209 212anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
260 261first strand
Strand 2
A
250 254anti-parallel
Strand 3
A
285 289anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
333 338first strand
Strand 2
A
385 392anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
372 373first strand
Strand 2
A
354 361anti-parallel
Strand 3
A
401 408anti-parallel
Strand 4
A
421 428anti-parallel
Strand 5
A
446 447anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
779 782first strand
Strand 2
A
798 803anti-parallel
Strand 3
A
845 849anti-parallel
Strand 4
A
838 842anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
921 923first strand
Strand 2
A
929 931anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il