Analysis of interatomic Contacts of Structural Units in PDB entry:
9XYS


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9XYS entry

There is 1 chain in PDB entry 9XYS (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1LYS 273
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 9XYS. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
3 10Right-handed alpha
Helix 2
AA2
A
11 26Right-handed alpha
Helix 3
AA3
A
27 29Right-handed 310
Helix 4
AA4
A
46 52Right-handed alpha
Helix 5
AA5
A
53 57Right-handed 310
Helix 6
AA6
A
70 82Right-handed alpha
Helix 7
AA7
A
98 102Right-handed 310
Helix 8
AA8
A
113 117Right-handed 310
Helix 9
AA9
A
119 130Right-handed alpha
Helix 10
AB1
A
145 155Right-handed alpha
Helix 11
AB2
A
160 164Right-handed 310
Helix 12
AB3
A
166 170Right-handed 310
Helix 13
AB4
A
179 192Right-handed alpha
Helix 14
AB5
A
209 219Right-handed alpha
Helix 15
AB6
A
226 228Right-handed 310
Helix 16
AB7
A
229 244Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 9XYS.

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
86 90first strand
Strand 2
A
61 68parallel
Strand 3
A
36 41parallel
Strand 4
A
105 111parallel
Strand 5
A
131 142parallel
Strand 6
A
260 272anti-parallel
Strand 7
A
194 207anti-parallel
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