Analysis of interatomic Contacts of Structural Units in PDB entry:
9XZA


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9XZA entry

There are 3 chains in PDB entry 9XZA (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 43ASP 424
B
 ARG 43ILE 422
C
 ARG 43ASP 424
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 56 helices in PDB entry 9XZA. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
43 61Right-handed alpha
Helix 2
AA2
A
62 66Right-handed 310
Helix 3
AA3
A
73 92Right-handed alpha
Helix 4
AA4
A
99 103Right-handed alpha
Helix 5
AA5
A
104 129Right-handed alpha
Helix 6
AA6
A
130 134Right-handed 310
Helix 7
AA7
A
137 161Right-handed alpha
Helix 8
AA8
A
162 165Right-handed 310
Helix 9
AA9
A
175 187Right-handed alpha
Helix 10
AB1
A
194 205Right-handed alpha
Helix 11
AB2
A
209 221Right-handed alpha
Helix 12
AB3
A
230 240Right-handed alpha
Helix 13
AB4
A
242 244Right-handed 310
Helix 14
AB5
A
245 255Right-handed alpha
Helix 15
AB6
A
265 275Right-handed alpha
Helix 16
AB7
A
315 326Right-handed alpha
Helix 17
AB8
A
356 368Right-handed alpha
Helix 18
AB9
A
393 403Right-handed alpha
Helix 19
AC1
B
44 61Right-handed alpha
Helix 20
AC2
B
62 66Right-handed 310
Helix 21
AC3
B
73 92Right-handed alpha
Helix 22
AC4
B
98 103Right-handed alpha
Helix 23
AC5
B
104 129Right-handed alpha
Helix 24
AC6
B
130 133Right-handed 310
Helix 25
AC7
B
137 161Right-handed alpha
Helix 26
AC8
B
162 165Right-handed 310
Helix 27
AC9
B
175 187Right-handed alpha
Helix 28
AD1
B
194 205Right-handed alpha
Helix 29
AD2
B
209 221Right-handed alpha
Helix 30
AD3
B
230 240Right-handed alpha
Helix 31
AD4
B
242 244Right-handed 310
Helix 32
AD5
B
245 255Right-handed alpha
Helix 33
AD6
B
265 275Right-handed alpha
Helix 34
AD7
B
315 326Right-handed alpha
Helix 35
AD8
B
356 368Right-handed alpha
Helix 36
AD9
B
393 403Right-handed alpha
Helix 37
AE1
C
44 61Right-handed alpha
Helix 38
AE2
C
62 66Right-handed 310
Helix 39
AE3
C
73 94Right-handed alpha
Helix 40
AE4
C
98 103Right-handed alpha
Helix 41
AE5
C
104 129Right-handed alpha
Helix 42
AE6
C
130 134Right-handed 310
Helix 43
AE7
C
137 161Right-handed alpha
Helix 44
AE8
C
162 165Right-handed 310
Helix 45
AE9
C
175 187Right-handed alpha
Helix 46
AF1
C
194 203Right-handed alpha
Helix 47
AF2
C
209 221Right-handed alpha
Helix 48
AF3
C
230 240Right-handed alpha
Helix 49
AF4
C
242 244Right-handed 310
Helix 50
AF5
C
245 254Right-handed alpha
Helix 51
AF6
C
265 274Right-handed alpha
Helix 52
AF7
C
275 277Right-handed 310
Helix 53
AF8
C
315 326Right-handed alpha
Helix 54
AF9
C
341 346Right-handed alpha
Helix 55
AG1
C
356 366Right-handed alpha
Helix 56
AG2
C
393 403Right-handed alpha
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There are 12 sheets in PDB entry 9XZA. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
191 193first strand
Strand 2
A
227 229anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
260 263first strand
Strand 2
A
282 288parallel
Strand 3
A
291 300anti-parallel
Strand 4
A
306 309anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
260 263first strand
Strand 2
A
282 288parallel
Strand 3
A
331 332parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
391 392first strand
Strand 2
A
383 386anti-parallel
Strand 3
A
417 420anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
191 193first strand
Strand 2
B
227 229anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
260 263first strand
Strand 2
B
282 287parallel
Strand 3
B
295 300anti-parallel
Strand 4
B
306 309anti-parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
260 263first strand
Strand 2
B
282 287parallel
Strand 3
B
331 332parallel
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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
391 392first strand
Strand 2
B
383 386anti-parallel
Strand 3
B
417 420anti-parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
191 193first strand
Strand 2
C
227 229anti-parallel
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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
260 263first strand
Strand 2
C
282 287parallel
Strand 3
C
295 300anti-parallel
Strand 4
C
306 309anti-parallel
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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
260 263first strand
Strand 2
C
282 287parallel
Strand 3
C
331 332parallel
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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
391 392first strand
Strand 2
C
383 386anti-parallel
Strand 3
C
417 420anti-parallel
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