Analysis of interatomic Contacts of Structural Units in PDB entry:
9XZK


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9XZK entry

There are 2 chains in PDB entry 9XZK (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
C
 GLU 301ALA 776
R
 ARG 21ASP 36
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 21 helices in PDB entry 9XZK. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
C
301 314Right-handed alpha
Helix 2
AA2
C
315 328Right-handed alpha
Helix 3
AA3
C
332 356Right-handed alpha
Helix 4
AA4
C
357 361Right-handed 310
Helix 5
AA5
C
362 384Right-handed alpha
Helix 6
AA6
C
388 404Right-handed alpha
Helix 7
AA7
C
406 413Right-handed alpha
Helix 8
AA8
C
416 431Right-handed alpha
Helix 9
AA9
C
438 454Right-handed alpha
Helix 10
AB1
C
458 477Right-handed alpha
Helix 11
AB2
C
481 497Right-handed alpha
Helix 12
AB3
C
497 527Right-handed alpha
Helix 13
AB4
C
559 574Right-handed alpha
Helix 14
AB5
C
583 586Right-handed 310
Helix 15
AB6
C
604 613Right-handed alpha
Helix 16
AB7
C
614 616Right-handed 310
Helix 17
AB8
C
622 630Right-handed alpha
Helix 18
AB9
C
632 646Right-handed alpha
Helix 19
AC1
C
688 723Right-handed alpha
Helix 20
AC2
C
727 739Right-handed alpha
Helix 21
AC3
C
745 759Right-handed alpha
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There are 4 sheets in PDB entry 9XZK. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
534 541first strand
Strand 2
R
22 35parallel
Strand 3
C
577 581anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
534 541first strand
Strand 2
R
22 35parallel
Strand 3
C
587 592anti-parallel
Strand 4
C
600 602anti-parallel
Strand 5
C
681 683parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
619 621first strand
Strand 2
C
668 671anti-parallel
Strand 3
C
649 651anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
724 726first strand
Strand 2
C
771 774anti-parallel
Strand 3
C
762 764anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il