Analysis of interatomic Contacts of Structural Units in PDB entry:
9Y0B


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9Y0B entry

There are 6 chains in PDB entry 9Y0B (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 200GLN 763
B
 GLU 200GLN 763
C
 GLU 200GLN 763
D
 GLU 200GLN 763
E
 GLU 200GLN 763
F
 GLU 200GLN 763
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are192 helices in PDB entry 9Y0B. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
202 206Right-handed 310
Helix 2
AA2
A
211 226Right-handed alpha
Helix 3
AA3
A
226 233Right-handed alpha
Helix 4
AA4
A
250 263Right-handed alpha
Helix 5
AA5
A
270 276Right-handed alpha
Helix 6
AA6
A
280 296Right-handed alpha
Helix 7
AA7
A
305 310Right-handed alpha
Helix 8
AA8
A
318 326Right-handed alpha
Helix 9
AA9
A
328 334Right-handed alpha
Helix 10
AB1
A
349 353Right-handed 310
Helix 11
AB2
A
354 359Right-handed 310
Helix 12
AB3
A
373 385Right-handed alpha
Helix 13
AB4
A
398 403Right-handed alpha
Helix 14
AB5
A
407 426Right-handed alpha
Helix 15
AB6
A
439 445Right-handed alpha
Helix 16
AB7
A
448 457Right-handed alpha
Helix 17
AB8
A
475 479Right-handed 310
Helix 18
AB9
A
482 499Right-handed alpha
Helix 19
AC1
A
499 507Right-handed alpha
Helix 20
AC2
A
523 536Right-handed alpha
Helix 21
AC3
A
543 553Right-handed alpha
Helix 22
AC4
A
557 569Right-handed alpha
Helix 23
AC5
A
580 586Right-handed alpha
Helix 24
AC6
A
598 610Right-handed alpha
Helix 25
AC7
A
625 629Right-handed 310
Helix 26
AC8
A
630 634Right-handed 310
Helix 27
AC9
A
649 661Right-handed alpha
Helix 28
AD1
A
662 664Right-handed 310
Helix 29
AD2
A
671 679Right-handed alpha
Helix 30
AD3
A
683 705Right-handed alpha
Helix 31
AD4
A
732 742Right-handed alpha
Helix 32
AD5
A
748 763Right-handed alpha
Helix 33
AD6
B
202 206Right-handed 310
Helix 34
AD7
B
211 226Right-handed alpha
Helix 35
AD8
B
226 233Right-handed alpha
Helix 36
AD9
B
250 263Right-handed alpha
Helix 37
AE1
B
270 277Right-handed alpha
Helix 38
AE2
B
281 296Right-handed alpha
Helix 39
AE3
B
305 310Right-handed alpha
Helix 40
AE4
B
318 326Right-handed alpha
Helix 41
AE5
B
328 334Right-handed alpha
Helix 42
AE6
B
349 353Right-handed 310
Helix 43
AE7
B
354 359Right-handed 310
Helix 44
AE8
B
373 385Right-handed alpha
Helix 45
AE9
B
398 403Right-handed alpha
Helix 46
AF1
B
407 426Right-handed alpha
Helix 47
AF2
B
439 445Right-handed alpha
Helix 48
AF3
B
448 458Right-handed alpha
Helix 49
AF4
B
475 479Right-handed 310
Helix 50
AF5
B
482 499Right-handed alpha
Helix 51
AF6
B
499 507Right-handed alpha
Helix 52
AF7
B
523 536Right-handed alpha
Helix 53
AF8
B
543 554Right-handed alpha
Helix 54
AF9
B
557 569Right-handed alpha
Helix 55
AG1
B
580 586Right-handed alpha
Helix 56
AG2
B
598 610Right-handed alpha
Helix 57
AG3
B
625 629Right-handed 310
Helix 58
AG4
B
630 634Right-handed 310
Helix 59
AG5
B
649 661Right-handed alpha
Helix 60
AG6
B
662 664Right-handed 310
Helix 61
AG7
B
671 679Right-handed alpha
Helix 62
AG8
B
683 705Right-handed alpha
Helix 63
AG9
B
732 742Right-handed alpha
Helix 64
AH1
B
748 763Right-handed alpha
Helix 65
AH2
C
202 206Right-handed 310
Helix 66
AH3
C
211 226Right-handed alpha
Helix 67
AH4
C
226 233Right-handed alpha
Helix 68
AH5
C
250 263Right-handed alpha
Helix 69
AH6
C
270 277Right-handed alpha
Helix 70
AH7
C
280 296Right-handed alpha
Helix 71
AH8
C
305 310Right-handed alpha
Helix 72
AH9
C
318 326Right-handed alpha
Helix 73
AI1
C
328 334Right-handed alpha
Helix 74
AI2
C
349 353Right-handed 310
Helix 75
AI3
C
354 359Right-handed 310
Helix 76
AI4
C
373 385Right-handed alpha
Helix 77
AI5
C
398 403Right-handed alpha
Helix 78
AI6
C
407 426Right-handed alpha
Helix 79
AI7
C
439 445Right-handed alpha
Helix 80
AI8
C
448 458Right-handed alpha
Helix 81
AI9
C
475 479Right-handed 310
Helix 82
AJ1
C
482 499Right-handed alpha
Helix 83
AJ2
C
499 507Right-handed alpha
Helix 84
AJ3
C
523 535Right-handed alpha
Helix 85
AJ4
C
543 553Right-handed alpha
Helix 86
AJ5
C
557 569Right-handed alpha
Helix 87
AJ6
C
580 586Right-handed alpha
Helix 88
AJ7
C
598 610Right-handed alpha
Helix 89
AJ8
C
625 629Right-handed 310
Helix 90
AJ9
C
630 634Right-handed 310
Helix 91
AK1
C
649 661Right-handed alpha
Helix 92
AK2
C
662 664Right-handed 310
Helix 93
AK3
C
671 679Right-handed alpha
Helix 94
AK4
C
683 705Right-handed alpha
Helix 95
AK5
C
732 742Right-handed alpha
Helix 96
AK6
C
748 763Right-handed alpha
Helix 97
AK7
D
202 206Right-handed 310
Helix 98
AK8
D
211 226Right-handed alpha
Helix 99
AK9
D
226 233Right-handed alpha
Helix 100
AL1
D
250 263Right-handed alpha
Helix 101
AL2
D
270 277Right-handed alpha
Helix 102
AL3
D
280 296Right-handed alpha
Helix 103
AL4
D
305 310Right-handed alpha
Helix 104
AL5
D
318 326Right-handed alpha
Helix 105
AL6
D
328 334Right-handed alpha
Helix 106
AL7
D
349 353Right-handed 310
Helix 107
AL8
D
354 359Right-handed 310
Helix 108
AL9
D
373 385Right-handed alpha
Helix 109
AM1
D
398 403Right-handed alpha
Helix 110
AM2
D
407 426Right-handed alpha
Helix 111
AM3
D
439 445Right-handed alpha
Helix 112
AM4
D
448 458Right-handed alpha
Helix 113
AM5
D
475 479Right-handed 310
Helix 114
AM6
D
482 499Right-handed alpha
Helix 115
AM7
D
499 507Right-handed alpha
Helix 116
AM8
D
523 536Right-handed alpha
Helix 117
AM9
D
543 553Right-handed alpha
Helix 118
AN1
D
557 569Right-handed alpha
Helix 119
AN2
D
580 586Right-handed alpha
Helix 120
AN3
D
598 610Right-handed alpha
Helix 121
AN4
D
625 629Right-handed 310
Helix 122
AN5
D
630 634Right-handed 310
Helix 123
AN6
D
649 661Right-handed alpha
Helix 124
AN7
D
662 664Right-handed 310
Helix 125
AN8
D
671 679Right-handed alpha
Helix 126
AN9
D
683 705Right-handed alpha
Helix 127
AO1
D
732 742Right-handed alpha
Helix 128
AO2
D
748 763Right-handed alpha
Helix 129
AO3
E
202 206Right-handed 310
Helix 130
AO4
E
211 226Right-handed alpha
Helix 131
AO5
E
226 233Right-handed alpha
Helix 132
AO6
E
250 263Right-handed alpha
Helix 133
AO7
E
270 277Right-handed alpha
Helix 134
AO8
E
280 296Right-handed alpha
Helix 135
AO9
E
305 310Right-handed alpha
Helix 136
AP1
E
318 326Right-handed alpha
Helix 137
AP2
E
328 334Right-handed alpha
Helix 138
AP3
E
349 353Right-handed 310
Helix 139
AP4
E
354 359Right-handed 310
Helix 140
AP5
E
373 385Right-handed alpha
Helix 141
AP6
E
398 403Right-handed alpha
Helix 142
AP7
E
407 426Right-handed alpha
Helix 143
AP8
E
439 445Right-handed alpha
Helix 144
AP9
E
448 457Right-handed alpha
Helix 145
AQ1
E
475 479Right-handed 310
Helix 146
AQ2
E
482 499Right-handed alpha
Helix 147
AQ3
E
499 507Right-handed alpha
Helix 148
AQ4
E
523 536Right-handed alpha
Helix 149
AQ5
E
543 554Right-handed alpha
Helix 150
AQ6
E
557 569Right-handed alpha
Helix 151
AQ7
E
580 586Right-handed alpha
Helix 152
AQ8
E
598 610Right-handed alpha
Helix 153
AQ9
E
625 629Right-handed 310
Helix 154
AR1
E
630 634Right-handed 310
Helix 155
AR2
E
649 661Right-handed alpha
Helix 156
AR3
E
662 664Right-handed 310
Helix 157
AR4
E
671 679Right-handed alpha
Helix 158
AR5
E
683 705Right-handed alpha
Helix 159
AR6
E
732 742Right-handed alpha
Helix 160
AR7
E
748 763Right-handed alpha
Helix 161
AR8
F
202 206Right-handed 310
Helix 162
AR9
F
211 226Right-handed alpha
Helix 163
AS1
F
226 233Right-handed alpha
Helix 164
AS2
F
250 263Right-handed alpha
Helix 165
AS3
F
270 277Right-handed alpha
Helix 166
AS4
F
280 296Right-handed alpha
Helix 167
AS5
F
305 310Right-handed alpha
Helix 168
AS6
F
318 326Right-handed alpha
Helix 169
AS7
F
328 334Right-handed alpha
Helix 170
AS8
F
349 353Right-handed 310
Helix 171
AS9
F
354 359Right-handed 310
Helix 172
AT1
F
373 385Right-handed alpha
Helix 173
AT2
F
398 403Right-handed alpha
Helix 174
AT3
F
407 426Right-handed alpha
Helix 175
AT4
F
439 445Right-handed alpha
Helix 176
AT5
F
448 458Right-handed alpha
Helix 177
AT6
F
475 479Right-handed 310
Helix 178
AT7
F
482 499Right-handed alpha
Helix 179
AT8
F
499 507Right-handed alpha
Helix 180
AT9
F
523 536Right-handed alpha
Helix 181
AU1
F
543 553Right-handed alpha
Helix 182
AU2
F
557 569Right-handed alpha
Helix 183
AU3
F
580 586Right-handed alpha
Helix 184
AU4
F
598 610Right-handed alpha
Helix 185
AU5
F
625 629Right-handed 310
Helix 186
AU6
F
630 634Right-handed 310
Helix 187
AU7
F
649 661Right-handed alpha
Helix 188
AU8
F
662 664Right-handed 310
Helix 189
AU9
F
671 679Right-handed alpha
Helix 190
AV1
F
683 705Right-handed alpha
Helix 191
AV2
F
732 742Right-handed alpha
Helix 192
AV3
F
748 763Right-handed alpha
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There are 12 sheets in PDB entry 9Y0B. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
265 268first strand
Strand 2
A
299 302parallel
Strand 3
A
341 347parallel
Strand 4
A
240 244parallel
Strand 5
A
365 368parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
538 542first strand
Strand 2
A
572 576parallel
Strand 3
A
617 623parallel
Strand 4
A
513 517parallel
Strand 5
A
641 644parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
265 268first strand
Strand 2
B
299 302parallel
Strand 3
B
341 347parallel
Strand 4
B
240 244parallel
Strand 5
B
365 368parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
538 542first strand
Strand 2
B
572 576parallel
Strand 3
B
617 623parallel
Strand 4
B
513 517parallel
Strand 5
B
641 644parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
265 268first strand
Strand 2
C
299 302parallel
Strand 3
C
341 347parallel
Strand 4
C
240 244parallel
Strand 5
C
365 368parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
538 542first strand
Strand 2
C
572 576parallel
Strand 3
C
617 623parallel
Strand 4
C
513 517parallel
Strand 5
C
641 644parallel
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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
265 268first strand
Strand 2
D
299 302parallel
Strand 3
D
341 347parallel
Strand 4
D
240 244parallel
Strand 5
D
365 368parallel
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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
538 542first strand
Strand 2
D
572 576parallel
Strand 3
D
617 623parallel
Strand 4
D
513 517parallel
Strand 5
D
641 644parallel
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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
265 268first strand
Strand 2
E
299 302parallel
Strand 3
E
341 347parallel
Strand 4
E
240 244parallel
Strand 5
E
365 368parallel
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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
538 542first strand
Strand 2
E
572 576parallel
Strand 3
E
617 623parallel
Strand 4
E
513 517parallel
Strand 5
E
641 644parallel
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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
265 268first strand
Strand 2
F
299 302parallel
Strand 3
F
341 347parallel
Strand 4
F
240 244parallel
Strand 5
F
365 368parallel
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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
538 542first strand
Strand 2
F
572 576parallel
Strand 3
F
617 623parallel
Strand 4
F
513 517parallel
Strand 5
F
641 644parallel
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