Analysis of interatomic Contacts of Structural Units in PDB entry:
9Y67

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9Y67 entry

There is 1 chain in PDB entry 9Y67 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLY 584	GLU 2527

There are 53 helices in PDB entry 9Y67. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	584	596	Right-handed alpha
Helix 2	AA2	A	598	603	Right-handed alpha
Helix 3	AA3	A	603	612	Right-handed alpha
Helix 4	AA4	A	625	638	Right-handed alpha
Helix 5	AA5	A	643	658	Right-handed alpha
Helix 6	AA6	A	660	669	Right-handed alpha
Helix 7	AA7	A	671	681	Right-handed alpha
Helix 8	AA8	A	688	703	Right-handed alpha
Helix 9	AA9	A	709	719	Right-handed alpha
Helix 10	AB1	A	721	731	Right-handed alpha
Helix 11	AB2	A	743	751	Right-handed alpha
Helix 12	AB3	A	754	764	Right-handed alpha
Helix 13	AB4	A	767	781	Right-handed alpha
Helix 14	AB5	A	786	795	Right-handed alpha
Helix 15	AB6	A	814	819	Right-handed alpha
Helix 16	AB7	A	833	853	Right-handed alpha
Helix 17	AB8	A	1004	1008	Right-handed 310
Helix 18	AB9	A	1027	1034	Right-handed alpha
Helix 19	AC1	A	1189	1194	Right-handed alpha
Helix 20	AC2	A	1213	1217	Right-handed 310
Helix 21	AC3	A	1240	1245	Right-handed 310
Helix 22	AC4	A	1261	1267	Right-handed 310
Helix 23	AC5	A	1285	1291	Right-handed 310
Helix 24	AC6	A	1315	1328	Right-handed alpha
Helix 25	AC7	A	1346	1355	Right-handed alpha
Helix 26	AC8	A	1404	1409	Right-handed 310
Helix 27	AC9	A	1426	1442	Right-handed alpha
Helix 28	AD1	A	1466	1473	Right-handed alpha
Helix 29	AD2	A	1494	1507	Right-handed alpha
Helix 30	AD3	A	1517	1520	Right-handed 310
Helix 31	AD4	A	1525	1539	Right-handed alpha
Helix 32	AD5	A	1549	1560	Right-handed alpha
Helix 33	AD6	A	1568	1579	Right-handed alpha
Helix 34	AD7	A	1599	1608	Right-handed alpha
Helix 35	AD8	A	1645	1656	Right-handed alpha
Helix 36	AD9	A	1703	1716	Right-handed alpha
Helix 37	AE1	A	1770	1791	Right-handed alpha
Helix 38	AE2	A	1829	1835	Right-handed alpha
Helix 39	AE3	A	1913	1922	Right-handed alpha
Helix 40	AE4	A	1954	1962	Right-handed alpha
Helix 41	AE5	A	1963	1966	Right-handed 310
Helix 42	AE6	A	1969	1985	Right-handed alpha
Helix 43	AE7	A	1996	1998	Right-handed 310
Helix 44	AE8	A	2040	2045	Right-handed alpha
Helix 45	AE9	A	2053	2068	Right-handed alpha
Helix 46	AF1	A	2070	2077	Right-handed alpha
Helix 47	AF2	A	2079	2090	Right-handed alpha
Helix 48	AF3	A	2094	2099	Right-handed alpha
Helix 49	AF4	A	2104	2115	Right-handed alpha
Helix 50	AF5	A	2124	2134	Right-handed alpha
Helix 51	AF6	A	2135	2140	Right-handed alpha
Helix 52	AF7	A	2389	2394	Right-handed alpha
Helix 53	AF8	A	2499	2525	Right-handed alpha

There are 17 sheets in PDB entry 9Y67. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	802	804	first strand
Strand 2	A	986	988	parallel
Strand 3	A	1015	1017	parallel
Strand 4	A	1040	1041	parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1063	1064	first strand
Strand 2	A	1087	1089	parallel
Strand 3	A	1111	1113	parallel
Strand 4	A	1133	1135	parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1157	1159	first strand
Strand 2	A	1177	1179	parallel
Strand 3	A	1200	1202	parallel
Strand 4	A	1224	1226	parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1249	1251	first strand
Strand 2	A	1272	1274	parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1329	1331	first strand
Strand 2	A	1522	1524	anti-parallel

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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1376	1377	first strand
Strand 2	A	1389	1394	anti-parallel
Strand 3	A	1334	1340	parallel
Strand 4	A	1414	1419	parallel
Strand 5	A	1447	1451	parallel
Strand 6	A	1482	1487	parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1582	1583	first strand
Strand 2	A	1597	1598	anti-parallel

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There are 7 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1733	1734	first strand
Strand 2	A	1737	1741	anti-parallel
Strand 3	A	1747	1753	anti-parallel
Strand 4	A	1761	1768	anti-parallel
Strand 5	A	1690	1697	anti-parallel
Strand 6	A	1809	1814	anti-parallel
Strand 7	A	1825	1828	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1840	1841	first strand
Strand 2	A	1850	1851	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1894	1897	first strand
Strand 2	A	1902	1905	anti-parallel
Strand 3	A	1944	1947	anti-parallel
Strand 4	A	1935	1939	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2000	2002	first strand
Strand 2	A	2013	2015	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2142	2145	first strand
Strand 2	A	2492	2496	anti-parallel
Strand 3	A	2470	2473	anti-parallel
Strand 4	A	2457	2460	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2199	2205	first strand
Strand 2	A	2214	2219	anti-parallel
Strand 3	A	2223	2228	anti-parallel
Strand 4	A	2236	2240	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2245	2249	first strand
Strand 2	A	2264	2267	anti-parallel
Strand 3	A	2271	2274	anti-parallel
Strand 4	A	2289	2292	anti-parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2300	2305	first strand
Strand 2	A	2315	2319	anti-parallel
Strand 3	A	2322	2326	anti-parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2354	2359	first strand
Strand 2	A	2362	2367	anti-parallel
Strand 3	A	2372	2377	anti-parallel
Strand 4	A	2385	2388	anti-parallel

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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2416	2419	first strand
Strand 2	A	2424	2428	anti-parallel
Strand 3	A	2434	2438	anti-parallel
Strand 4	A	2444	2448	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9Y67

Analysis of interatomic Contacts of Structural Units in PDB entry:
9Y67