Analysis of interatomic Contacts of Structural Units in PDB entry:
9Y7A


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9Y7A entry

There is 1 chain in PDB entry 9Y7A (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 1319GLU 2527
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 26 helices in PDB entry 9Y7A. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
1346 1355Right-handed alpha
Helix 2
AA2
A
1425 1442Right-handed alpha
Helix 3
AA3
A
1494 1507Right-handed alpha
Helix 4
AA4
A
1527 1535Right-handed alpha
Helix 5
AA5
A
1568 1573Right-handed alpha
Helix 6
AA6
A
1599 1612Right-handed alpha
Helix 7
AA7
A
1635 1640Right-handed alpha
Helix 8
AA8
A
1641 1645Right-handed 310
Helix 9
AA9
A
1686 1688Right-handed 310
Helix 10
AB1
A
1708 1714Right-handed alpha
Helix 11
AB2
A
1770 1790Right-handed alpha
Helix 12
AB3
A
1793 1797Right-handed 310
Helix 13
AB4
A
1829 1835Right-handed alpha
Helix 14
AB5
A
1851 1856Right-handed alpha
Helix 15
AB6
A
1915 1926Right-handed alpha
Helix 16
AB7
A
1967 1985Right-handed alpha
Helix 17
AB8
A
1996 1998Right-handed 310
Helix 18
AB9
A
2054 2068Right-handed alpha
Helix 19
AC1
A
2073 2079Right-handed alpha
Helix 20
AC2
A
2081 2089Right-handed alpha
Helix 21
AC3
A
2094 2100Right-handed alpha
Helix 22
AC4
A
2104 2115Right-handed alpha
Helix 23
AC5
A
2124 2133Right-handed alpha
Helix 24
AC6
A
2161 2165Right-handed 310
Helix 25
AC7
A
2389 2395Right-handed alpha
Helix 26
AC8
A
2499 2522Right-handed alpha
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There are 11 sheets in PDB entry 9Y7A. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1335 1336first strand
Strand 2
A
1390 1394parallel
Strand 3
A
1372 1375anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1338 1340first strand
Strand 2
A
1415 1420parallel
Strand 3
A
1447 1452parallel
Strand 4
A
1484 1487parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1749 1753first strand
Strand 2
A
1761 1768anti-parallel
Strand 3
A
1690 1697anti-parallel
Strand 4
A
1809 1814anti-parallel
Strand 5
A
1825 1828anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1935 1937first strand
Strand 2
A
1946 1947anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2000 2002first strand
Strand 2
A
2013 2015anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2168 2169first strand
Strand 2
A
2180 2181anti-parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2214 2217first strand
Strand 2
A
2225 2228anti-parallel
Strand 3
A
2234 2237anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2316 2317first strand
Strand 2
A
2324 2325anti-parallel
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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2356 2359first strand
Strand 2
A
2363 2366anti-parallel
Strand 3
A
2373 2374anti-parallel
Strand 4
A
2386 2387anti-parallel
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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2424 2426first strand
Strand 2
A
2436 2438anti-parallel
Strand 3
A
2443 2446anti-parallel
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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2457 2461first strand
Strand 2
A
2469 2474anti-parallel
Strand 3
A
2492 2495anti-parallel
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