Analysis of interatomic Contacts of Structural Units in PDB entry:
9Y90

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9Y90 entry

There are 12 chains in PDB entry 9Y90 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
F	GLN 1	SER 113
I	PHE 1	LYS 107
J	PHE 519	ASP 664
K	GLU 32	VAL 505
A	GLN 1	SER 113
B	PHE 1	LYS 107
C	PHE 519	ASP 664
D	GLU 32	VAL 505
E	GLN 1	SER 113
G	PHE 1	LYS 107
H	PHE 519	ASP 664
L	GLU 32	VAL 505

There are 60 helices in PDB entry 9Y90. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	F	28	30	Right-handed 310
Helix 2	AA2	F	61	64	Right-handed 310
Helix 3	AA3	F	83	87	Right-handed 310
Helix 4	AA4	F	98	100	Right-handed 310
Helix 5	AA5	J	523	527	Right-handed 310
Helix 6	AA6	J	529	534	Right-handed alpha
Helix 7	AA7	J	536	544	Right-handed alpha
Helix 8	AA8	J	547	558	Right-handed 310
Helix 9	AA9	J	569	596	Right-handed alpha
Helix 10	AB1	J	611	615	Right-handed 310
Helix 11	AB2	J	627	636	Right-handed alpha
Helix 12	AB3	J	638	664	Right-handed alpha
Helix 13	AB4	K	57	64	Right-handed 310
Helix 14	AB5	K	70	74	Right-handed 310
Helix 15	AB6	K	99	117	Right-handed alpha
Helix 16	AB7	K	123	126	Right-handed 310
Helix 17	AB8	K	334	354	Right-handed alpha
Helix 18	AB9	K	368	373	Right-handed alpha
Helix 19	AC1	K	387	390	Right-handed 310
Helix 20	AC2	K	474	482	Right-handed 310
Helix 21	AC3	A	28	30	Right-handed 310
Helix 22	AC4	A	61	64	Right-handed 310
Helix 23	AC5	A	83	87	Right-handed 310
Helix 24	AC6	A	98	100	Right-handed 310
Helix 25	AC7	C	529	534	Right-handed alpha
Helix 26	AC8	C	537	544	Right-handed alpha
Helix 27	AC9	C	547	557	Right-handed 310
Helix 28	AD1	C	569	595	Right-handed alpha
Helix 29	AD2	C	611	615	Right-handed 310
Helix 30	AD3	C	627	635	Right-handed alpha
Helix 31	AD4	C	638	662	Right-handed alpha
Helix 32	AD5	D	57	64	Right-handed 310
Helix 33	AD6	D	98	117	Right-handed alpha
Helix 34	AD7	D	123	126	Right-handed 310
Helix 35	AD8	D	334	354	Right-handed alpha
Helix 36	AD9	D	368	373	Right-handed alpha
Helix 37	AE1	D	377	381	Right-handed 310
Helix 38	AE2	D	387	390	Right-handed 310
Helix 39	AE3	D	475	480	Right-handed alpha
Helix 40	AE4	E	28	30	Right-handed 310
Helix 41	AE5	E	61	64	Right-handed 310
Helix 42	AE6	E	83	87	Right-handed 310
Helix 43	AE7	E	98	100	Right-handed 310
Helix 44	AE8	H	523	527	Right-handed 310
Helix 45	AE9	H	529	534	Right-handed alpha
Helix 46	AF1	H	537	544	Right-handed alpha
Helix 47	AF2	H	547	558	Right-handed 310
Helix 48	AF3	H	569	596	Right-handed alpha
Helix 49	AF4	H	611	615	Right-handed 310
Helix 50	AF5	H	627	636	Right-handed alpha
Helix 51	AF6	H	638	664	Right-handed alpha
Helix 52	AF7	L	59	64	Right-handed alpha
Helix 53	AF8	L	70	74	Right-handed 310
Helix 54	AF9	L	98	117	Right-handed alpha
Helix 55	AG1	L	123	126	Right-handed 310
Helix 56	AG2	L	195	198	Right-handed 310
Helix 57	AG3	L	334	354	Right-handed alpha
Helix 58	AG4	L	368	373	Right-handed alpha
Helix 59	AG5	L	386	390	Right-handed 310
Helix 60	AG6	L	474	482	Right-handed 310

There are 53 sheets in PDB entry 9Y90. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8, AE9, AF1, AF2, AF3, AF4, AF5, AF6, AF7, AF8,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	3	6	first strand
Strand 2	F	18	25	anti-parallel
Strand 3	F	77	82	anti-parallel
Strand 4	F	67	71	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	10	12	first strand
Strand 2	F	108	111	parallel
Strand 3	F	88	96	anti-parallel
Strand 4	F	32	39	anti-parallel
Strand 5	F	45	51	anti-parallel
Strand 6	F	57	59	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	5	6	first strand
Strand 2	I	19	24	anti-parallel
Strand 3	I	71	75	anti-parallel
Strand 4	I	62	66	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	53	54	first strand
Strand 2	I	45	49	anti-parallel
Strand 3	I	34	38	anti-parallel
Strand 4	I	85	90	anti-parallel
Strand 5	I	97	98	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	53	54	first strand
Strand 2	I	45	49	anti-parallel
Strand 3	I	34	38	anti-parallel
Strand 4	I	85	90	anti-parallel
Strand 5	I	102	103	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	603	609	first strand
Strand 2	K	35	40	anti-parallel
Strand 3	K	494	499	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	45	47	first strand
Strand 2	K	486	491	anti-parallel
Strand 3	K	223	228	anti-parallel
Strand 4	K	242	245	anti-parallel
Strand 5	K	83	86	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	53	55	first strand
Strand 2	K	216	218	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	91	94	first strand
Strand 2	K	236	239	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	120	121	first strand
Strand 2	K	202	203	anti-parallel
Strand 3	K	434	435	parallel
Strand 4	K	423	424	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	169	177	first strand
Strand 2	K	154	162	anti-parallel
Strand 3	K	129	133	anti-parallel
Strand 4	K	190	193	anti-parallel
Strand 5	K	181	183	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	259	261	first strand
Strand 2	K	446	456	anti-parallel
Strand 3	K	284	295	anti-parallel
Strand 4	K	271	273	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	259	261	first strand
Strand 2	K	446	456	anti-parallel
Strand 3	K	468	470	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	298	302	first strand
Strand 2	K	441	443	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	304	312	first strand
Strand 2	K	315	320	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	329	333	first strand
Strand 2	K	414	421	anti-parallel
Strand 3	K	382	385	anti-parallel
Strand 4	K	374	377	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	359	361	first strand
Strand 2	K	393	395	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	3	6	first strand
Strand 2	A	18	25	anti-parallel
Strand 3	A	78	82	anti-parallel
Strand 4	A	67	71	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	10	12	first strand
Strand 2	A	108	111	parallel
Strand 3	A	88	96	anti-parallel
Strand 4	A	32	39	anti-parallel
Strand 5	A	46	51	anti-parallel
Strand 6	A	57	59	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	19	22	first strand
Strand 2	B	71	75	anti-parallel
Strand 3	B	62	66	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	53	54	first strand
Strand 2	B	45	49	anti-parallel
Strand 3	B	34	38	anti-parallel
Strand 4	B	85	90	anti-parallel
Strand 5	B	97	98	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	603	609	first strand
Strand 2	D	35	40	anti-parallel
Strand 3	D	494	499	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	45	47	first strand
Strand 2	D	486	491	anti-parallel
Strand 3	D	223	228	anti-parallel
Strand 4	D	242	245	anti-parallel
Strand 5	D	84	85	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	53	55	first strand
Strand 2	D	216	218	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	66	67	first strand
Strand 2	D	208	209	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	91	94	first strand
Strand 2	D	236	239	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	120	121	first strand
Strand 2	D	202	203	anti-parallel
Strand 3	D	434	435	parallel
Strand 4	D	423	424	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	154	162	first strand
Strand 2	D	169	177	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	181	183	first strand
Strand 2	D	191	193	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	259	261	first strand
Strand 2	D	446	456	anti-parallel
Strand 3	D	284	295	anti-parallel
Strand 4	D	271	273	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	259	261	first strand
Strand 2	D	446	456	anti-parallel
Strand 3	D	468	470	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	315	323	first strand
Strand 2	D	298	312	anti-parallel
Strand 3	D	441	443	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	329	333	first strand
Strand 2	D	414	421	anti-parallel
Strand 3	D	382	385	anti-parallel
Strand 4	D	374	376	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	359	361	first strand
Strand 2	D	393	395	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	3	6	first strand
Strand 2	E	18	25	anti-parallel
Strand 3	E	77	82	anti-parallel
Strand 4	E	67	71	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	10	12	first strand
Strand 2	E	108	111	parallel
Strand 3	E	88	96	anti-parallel
Strand 4	E	32	39	anti-parallel
Strand 5	E	45	51	anti-parallel
Strand 6	E	57	59	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	19	22	first strand
Strand 2	G	71	75	anti-parallel
Strand 3	G	62	66	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	53	54	first strand
Strand 2	G	45	49	anti-parallel
Strand 3	G	34	38	anti-parallel
Strand 4	G	85	90	anti-parallel
Strand 5	G	97	98	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	53	54	first strand
Strand 2	G	45	49	anti-parallel
Strand 3	G	34	38	anti-parallel
Strand 4	G	85	90	anti-parallel
Strand 5	G	102	103	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	603	609	first strand
Strand 2	L	35	40	anti-parallel
Strand 3	L	494	499	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	45	47	first strand
Strand 2	L	486	491	anti-parallel
Strand 3	L	223	228	anti-parallel
Strand 4	L	242	245	anti-parallel
Strand 5	L	83	86	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	53	55	first strand
Strand 2	L	216	218	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	91	94	first strand
Strand 2	L	236	239	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AE8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	120	121	first strand
Strand 2	L	202	203	anti-parallel
Strand 3	L	434	435	parallel
Strand 4	L	423	424	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AE9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	129	130	first strand
Strand 2	L	190	193	anti-parallel
Strand 3	L	181	183	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AF1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	154	162	first strand
Strand 2	L	169	177	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AF2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	259	261	first strand
Strand 2	L	446	456	anti-parallel
Strand 3	L	284	295	anti-parallel
Strand 4	L	271	273	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AF3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	259	261	first strand
Strand 2	L	446	456	anti-parallel
Strand 3	L	468	470	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AF4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	298	302	first strand
Strand 2	L	441	443	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AF5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	304	312	first strand
Strand 2	L	315	320	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AF6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	331	333	first strand
Strand 2	L	414	416	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AF7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	359	360	first strand
Strand 2	L	394	395	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AF8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	374	377	first strand
Strand 2	L	382	385	anti-parallel
Strand 3	L	419	421	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9Y90

Analysis of interatomic Contacts of Structural Units in PDB entry:
9Y90