Analysis of interatomic Contacts of Structural Units in PDB entry:
9YDY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9YDY entry

There are 2 chains in PDB entry 9YDY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 788MET 835
B
 VAL 785GLU 836
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 2 helices in PDB entry 9YDY. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
788 834Right-handed alpha
Helix 2
AA2
B
786 834Right-handed alpha
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There are no sheets in PDB entry 9YDY
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il