Analysis of interatomic Contacts of Structural Units in PDB entry:
9YR4


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9YR4 entry

There are 2 chains in PDB entry 9YR4 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 109PRO 605
B
 GLU 729ASP 732
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 25 helices in PDB entry 9YR4. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
110 128Right-handed alpha
Helix 2
AA2
A
129 143Right-handed alpha
Helix 3
AA3
A
150 165Right-handed alpha
Helix 4
AA4
A
169 183Right-handed alpha
Helix 5
AA5
A
187 200Right-handed alpha
Helix 6
AA6
A
202 218Right-handed alpha
Helix 7
AA7
A
221 245Right-handed alpha
Helix 8
AA8
A
253 263Right-handed alpha
Helix 9
AA9
A
296 308Right-handed alpha
Helix 10
AB1
A
312 323Right-handed alpha
Helix 11
AB2
A
328 342Right-handed alpha
Helix 12
AB3
A
348 358Right-handed alpha
Helix 13
AB4
A
362 380Right-handed alpha
Helix 14
AB5
A
382 397Right-handed alpha
Helix 15
AB6
A
400 414Right-handed alpha
Helix 16
AB7
A
416 431Right-handed alpha
Helix 17
AB8
A
435 453Right-handed alpha
Helix 18
AB9
A
454 472Right-handed alpha
Helix 19
AC1
A
475 489Right-handed alpha
Helix 20
AC2
A
491 506Right-handed alpha
Helix 21
AC3
A
509 524Right-handed alpha
Helix 22
AC4
A
526 541Right-handed alpha
Helix 23
AC5
A
544 559Right-handed alpha
Helix 24
AC6
A
561 573Right-handed alpha
Helix 25
AC7
A
577 602Right-handed alpha
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There are no sheets in PDB entry 9YR4
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