Analysis of interatomic Contacts of Structural Units in PDB entry:
9YZ5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9YZ5 entry

There are 2 chains in PDB entry 9YZ5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 105THR 433
B
 GLU 105THR 433
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 34 helices in PDB entry 9YZ5. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
105 119Right-handed alpha
Helix 2
AA2
A
121 136Right-handed alpha
Helix 3
AA3
A
139 152Right-handed alpha
Helix 4
AA4
A
155 170Right-handed alpha
Helix 5
AA5
A
173 206Right-handed alpha
Helix 6
AA6
A
212 233Right-handed alpha
Helix 7
AA7
A
239 250Right-handed alpha
Helix 8
AA8
A
257 278Right-handed alpha
Helix 9
AA9
A
286 299Right-handed alpha
Helix 10
AB1
A
323 325Right-handed 310
Helix 11
AB2
A
326 339Right-handed alpha
Helix 12
AB3
A
340 345Right-handed alpha
Helix 13
AB4
A
347 363Right-handed alpha
Helix 14
AB5
A
368 384Right-handed alpha
Helix 15
AB6
A
395 409Right-handed alpha
Helix 16
AB7
A
411 431Right-handed alpha
Helix 17
AB8
A
432 433Right-handed 310
Helix 18
AB9
B
105 105Right-handed 310
Helix 19
AC1
B
106 119Right-handed alpha
Helix 20
AC2
B
121 136Right-handed alpha
Helix 21
AC3
B
139 153Right-handed alpha
Helix 22
AC4
B
155 170Right-handed alpha
Helix 23
AC5
B
173 208Right-handed alpha
Helix 24
AC6
B
212 234Right-handed alpha
Helix 25
AC7
B
239 250Right-handed alpha
Helix 26
AC8
B
257 278Right-handed alpha
Helix 27
AC9
B
286 298Right-handed alpha
Helix 28
AD1
B
323 325Right-handed 310
Helix 29
AD2
B
326 339Right-handed alpha
Helix 30
AD3
B
340 345Right-handed alpha
Helix 31
AD4
B
347 363Right-handed alpha
Helix 32
AD5
B
368 385Right-handed alpha
Helix 33
AD6
B
395 408Right-handed alpha
Helix 34
AD7
B
411 432Right-handed alpha
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There are no sheets in PDB entry 9YZ5
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