Analysis of interatomic Contacts of Structural Units in PDB entry:
9Z04


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9Z04 entry

There are 6 chains in PDB entry 9Z04 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 24ALA 457
B
 ALA 24ALA 457
C
 ALA 24ALA 457
D
 ALA 24ALA 457
E
 ALA 24ALA 457
F
 ALA 24ALA 457
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 83 helices in PDB entry 9Z04. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
27 102Right-handed alpha
Helix 2
AA2
A
224 239Right-handed alpha
Helix 3
AA3
A
254 268Right-handed alpha
Helix 4
AA4
A
279 281Right-handed 310
Helix 5
AA5
A
282 294Right-handed alpha
Helix 6
AA6
A
305 313Right-handed alpha
Helix 7
AA7
A
314 316Right-handed 310
Helix 8
AA8
A
333 339Right-handed alpha
Helix 9
AA9
A
341 345Right-handed 310
Helix 10
AB1
A
362 371Right-handed alpha
Helix 11
AB2
A
389 401Right-handed alpha
Helix 12
AB3
A
410 423Right-handed alpha
Helix 13
AB4
A
426 445Right-handed alpha
Helix 14
AB5
A
452 457Right-handed alpha
Helix 15
AB6
B
27 102Right-handed alpha
Helix 16
AB7
B
224 239Right-handed alpha
Helix 17
AB8
B
254 268Right-handed alpha
Helix 18
AB9
B
279 281Right-handed 310
Helix 19
AC1
B
282 294Right-handed alpha
Helix 20
AC2
B
305 311Right-handed alpha
Helix 21
AC3
B
312 316Right-handed 310
Helix 22
AC4
B
333 339Right-handed alpha
Helix 23
AC5
B
341 345Right-handed 310
Helix 24
AC6
B
362 371Right-handed alpha
Helix 25
AC7
B
389 401Right-handed alpha
Helix 26
AC8
B
410 423Right-handed alpha
Helix 27
AC9
B
426 445Right-handed alpha
Helix 28
AD1
B
452 457Right-handed alpha
Helix 29
AD2
C
27 102Right-handed alpha
Helix 30
AD3
C
224 239Right-handed alpha
Helix 31
AD4
C
253 268Right-handed alpha
Helix 32
AD5
C
279 281Right-handed 310
Helix 33
AD6
C
282 294Right-handed alpha
Helix 34
AD7
C
305 313Right-handed alpha
Helix 35
AD8
C
314 316Right-handed 310
Helix 36
AD9
C
333 339Right-handed alpha
Helix 37
AE1
C
341 345Right-handed 310
Helix 38
AE2
C
362 371Right-handed alpha
Helix 39
AE3
C
389 401Right-handed alpha
Helix 40
AE4
C
410 423Right-handed alpha
Helix 41
AE5
C
426 445Right-handed alpha
Helix 42
AE6
C
452 457Right-handed alpha
Helix 43
AE7
D
27 102Right-handed alpha
Helix 44
AE8
D
224 239Right-handed alpha
Helix 45
AE9
D
253 268Right-handed alpha
Helix 46
AF1
D
279 281Right-handed 310
Helix 47
AF2
D
282 294Right-handed alpha
Helix 48
AF3
D
305 311Right-handed alpha
Helix 49
AF4
D
312 316Right-handed 310
Helix 50
AF5
D
333 339Right-handed alpha
Helix 51
AF6
D
362 371Right-handed alpha
Helix 52
AF7
D
389 401Right-handed alpha
Helix 53
AF8
D
410 423Right-handed alpha
Helix 54
AF9
D
426 445Right-handed alpha
Helix 55
AG1
D
452 457Right-handed alpha
Helix 56
AG2
E
27 102Right-handed alpha
Helix 57
AG3
E
224 239Right-handed alpha
Helix 58
AG4
E
253 268Right-handed alpha
Helix 59
AG5
E
282 294Right-handed alpha
Helix 60
AG6
E
305 313Right-handed alpha
Helix 61
AG7
E
314 316Right-handed 310
Helix 62
AG8
E
333 339Right-handed alpha
Helix 63
AG9
E
341 345Right-handed 310
Helix 64
AH1
E
362 371Right-handed alpha
Helix 65
AH2
E
389 401Right-handed alpha
Helix 66
AH3
E
410 423Right-handed alpha
Helix 67
AH4
E
426 445Right-handed alpha
Helix 68
AH5
E
452 457Right-handed alpha
Helix 69
AH6
F
27 58Right-handed alpha
Helix 70
AH7
F
58 102Right-handed alpha
Helix 71
AH8
F
224 239Right-handed alpha
Helix 72
AH9
F
253 268Right-handed alpha
Helix 73
AI1
F
279 281Right-handed 310
Helix 74
AI2
F
282 294Right-handed alpha
Helix 75
AI3
F
305 313Right-handed alpha
Helix 76
AI4
F
314 316Right-handed 310
Helix 77
AI5
F
333 339Right-handed alpha
Helix 78
AI6
F
341 345Right-handed 310
Helix 79
AI7
F
362 371Right-handed alpha
Helix 80
AI8
F
389 401Right-handed alpha
Helix 81
AI9
F
410 423Right-handed alpha
Helix 82
AJ1
F
426 445Right-handed alpha
Helix 83
AJ2
F
452 457Right-handed alpha
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There are 6 sheets in PDB entry 9Z04. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
299 301first strand
Strand 2
A
328 332parallel
Strand 3
A
274 278parallel
Strand 4
A
350 354parallel
Strand 5
A
378 381parallel
Strand 6
A
244 246parallel
Strand 7
A
448 449parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
299 301first strand
Strand 2
B
328 332parallel
Strand 3
B
274 278parallel
Strand 4
B
350 354parallel
Strand 5
B
378 381parallel
Strand 6
B
244 246parallel
Strand 7
B
448 449parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
299 302first strand
Strand 2
C
328 332parallel
Strand 3
C
274 278parallel
Strand 4
C
350 354parallel
Strand 5
C
378 381parallel
Strand 6
C
244 246parallel
Strand 7
C
448 449parallel
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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
299 302first strand
Strand 2
D
328 332parallel
Strand 3
D
274 278parallel
Strand 4
D
350 354parallel
Strand 5
D
378 381parallel
Strand 6
D
244 246parallel
Strand 7
D
448 449parallel
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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
299 302first strand
Strand 2
E
328 332parallel
Strand 3
E
274 278parallel
Strand 4
E
350 354parallel
Strand 5
E
378 381parallel
Strand 6
E
244 246parallel
Strand 7
E
448 449parallel
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There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
299 302first strand
Strand 2
F
328 332parallel
Strand 3
F
274 278parallel
Strand 4
F
350 354parallel
Strand 5
F
378 381parallel
Strand 6
F
244 246parallel
Strand 7
F
448 449parallel
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