Analysis of interatomic Contacts of Structural Units in PDB entry:
9Z2Y


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9Z2Y entry

There are 2 chains in PDB entry 9Z2Y (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 TRP 3LEU 505
B
 TRP 3LEU 505
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 52 helices in PDB entry 9Z2Y. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
19 36Right-handed alpha
Helix 2
AA2
A
53 67Right-handed alpha
Helix 3
AA3
A
85 88Right-handed 310
Helix 4
AA4
A
89 103Right-handed alpha
Helix 5
AA5
A
196 208Right-handed alpha
Helix 6
AA6
A
218 221Right-handed 310
Helix 7
AA7
A
222 234Right-handed alpha
Helix 8
AA8
A
262 269Right-handed alpha
Helix 9
AA9
A
272 285Right-handed alpha
Helix 10
AB1
A
287 291Right-handed 310
Helix 11
AB2
A
295 303Right-handed alpha
Helix 12
AB3
A
304 308Right-handed 310
Helix 13
AB4
A
316 330Right-handed alpha
Helix 14
AB5
A
333 345Right-handed alpha
Helix 15
AB6
A
347 359Right-handed alpha
Helix 16
AB7
A
364 366Right-handed 310
Helix 17
AB8
A
367 373Right-handed alpha
Helix 18
AB9
A
374 377Right-handed 310
Helix 19
AC1
A
383 388Right-handed alpha
Helix 20
AC2
A
393 412Right-handed alpha
Helix 21
AC3
A
415 431Right-handed alpha
Helix 22
AC4
A
437 448Right-handed alpha
Helix 23
AC5
A
454 463Right-handed alpha
Helix 24
AC6
A
463 478Right-handed alpha
Helix 25
AC7
A
482 495Right-handed alpha
Helix 26
AC8
B
19 36Right-handed alpha
Helix 27
AC9
B
53 67Right-handed alpha
Helix 28
AD1
B
85 88Right-handed 310
Helix 29
AD2
B
89 103Right-handed alpha
Helix 30
AD3
B
112 118Right-handed alpha
Helix 31
AD4
B
140 150Right-handed alpha
Helix 32
AD5
B
196 208Right-handed alpha
Helix 33
AD6
B
218 221Right-handed 310
Helix 34
AD7
B
222 234Right-handed alpha
Helix 35
AD8
B
262 269Right-handed alpha
Helix 36
AD9
B
272 285Right-handed alpha
Helix 37
AE1
B
287 291Right-handed 310
Helix 38
AE2
B
295 303Right-handed alpha
Helix 39
AE3
B
304 308Right-handed 310
Helix 40
AE4
B
316 331Right-handed alpha
Helix 41
AE5
B
333 345Right-handed alpha
Helix 42
AE6
B
347 359Right-handed alpha
Helix 43
AE7
B
364 366Right-handed 310
Helix 44
AE8
B
367 373Right-handed alpha
Helix 45
AE9
B
374 377Right-handed 310
Helix 46
AF1
B
383 388Right-handed alpha
Helix 47
AF2
B
393 412Right-handed alpha
Helix 48
AF3
B
415 431Right-handed alpha
Helix 49
AF4
B
437 448Right-handed alpha
Helix 50
AF5
B
454 463Right-handed alpha
Helix 51
AF6
B
463 478Right-handed alpha
Helix 52
AF7
B
482 495Right-handed alpha
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There are 10 sheets in PDB entry 9Z2Y. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
7 10first strand
Strand 2
A
39 42parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
106 109first strand
Strand 2
A
155 158anti-parallel
Strand 3
A
187 189anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
165 170first strand
Strand 2
A
174 179anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
212 216first strand
Strand 2
A
239 243parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
246 247first strand
Strand 2
A
313 314parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
7 10first strand
Strand 2
B
39 42parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
106 109first strand
Strand 2
B
155 158anti-parallel
Strand 3
B
187 189anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
165 170first strand
Strand 2
B
174 179anti-parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
212 216first strand
Strand 2
B
239 243parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
246 247first strand
Strand 2
B
313 314parallel
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