Analysis of interatomic Contacts of Structural Units in PDB entry:
9Z3Q


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9Z3Q entry

There are 6 chains in PDB entry 9Z3Q (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 1LYS 107
B
 GLU 1SER 113
C
 ASP 1LYS 107
D
 VAL 2SER 113
E
 SER 36TYR 698
F
 ILE 19ASN 130
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 31 helices in PDB entry 9Z3Q. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
79 83Right-handed 310
Helix 2
AA2
D
28 31Right-handed 310
Helix 3
AA3
E
62 69Right-handed alpha
Helix 4
AA4
E
70 81Right-handed alpha
Helix 5
AA5
E
86 97Right-handed alpha
Helix 6
AA6
E
131 135Right-handed 310
Helix 7
AA7
E
146 154Right-handed alpha
Helix 8
AA8
E
166 171Right-handed alpha
Helix 9
AA9
E
237 241Right-handed alpha
Helix 10
AB1
E
261 265Right-handed 310
Helix 11
AB2
E
267 277Right-handed alpha
Helix 12
AB3
E
279 297Right-handed alpha
Helix 13
AB4
E
298 301Right-handed 310
Helix 14
AB5
E
305 330Right-handed alpha
Helix 15
AB6
E
335 356Right-handed alpha
Helix 16
AB7
E
367 378Right-handed alpha
Helix 17
AB8
E
381 388Right-handed alpha
Helix 18
AB9
E
392 404Right-handed alpha
Helix 19
AC1
E
410 429Right-handed alpha
Helix 20
AC2
E
436 451Right-handed alpha
Helix 21
AC3
E
457 475Right-handed alpha
Helix 22
AC4
E
476 487Right-handed alpha
Helix 23
AC5
E
500 504Right-handed 310
Helix 24
AC6
E
536 547Right-handed alpha
Helix 25
AC7
E
658 666Right-handed alpha
Helix 26
AC8
F
39 41Right-handed 310
Helix 27
AC9
F
77 91Right-handed alpha
Helix 28
AD1
F
92 95Right-handed 310
Helix 29
AD2
F
96 116Right-handed alpha
Helix 30
AD3
F
118 122Right-handed 310
Helix 31
AD4
F
123 128Right-handed 310
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There are 21 sheets in PDB entry 9Z3Q. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
10 12first strand
Strand 2
A
103 105parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
22 23first strand
Strand 2
A
71 72anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
27 27first strand
Strand 2
A
30 31anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
45 48first strand
Strand 2
A
33 38anti-parallel
Strand 3
A
85 90anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
62 63first strand
Strand 2
A
74 75anti-parallel
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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
10 12first strand
Strand 2
B
107 111parallel
Strand 3
B
88 95anti-parallel
Strand 4
B
34 38anti-parallel
Strand 5
B
46 51anti-parallel
Strand 6
B
57 59anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
10 12first strand
Strand 2
B
107 111parallel
Strand 3
B
88 95anti-parallel
Strand 4
B
100 103anti-parallel
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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
17 22first strand
Strand 2
B
77 82anti-parallel
Strand 3
B
67 72anti-parallel
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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
5 7first strand
Strand 2
C
19 24anti-parallel
Strand 3
C
70 75anti-parallel
Strand 4
C
64 67anti-parallel
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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
10 11first strand
Strand 2
C
102 104parallel
Strand 3
C
85 86anti-parallel
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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
33 35first strand
Strand 2
C
88 90anti-parallel
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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
48 49first strand
Strand 2
C
53 54anti-parallel
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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
5 6first strand
Strand 2
D
21 23anti-parallel
Strand 3
D
77 82anti-parallel
Strand 4
D
67 71anti-parallel
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There are 6 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
10 11first strand
Strand 2
D
107 110parallel
Strand 3
D
88 95anti-parallel
Strand 4
D
33 38anti-parallel
Strand 5
D
46 52anti-parallel
Strand 6
D
56 59anti-parallel
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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
10 11first strand
Strand 2
D
107 110parallel
Strand 3
D
88 95anti-parallel
Strand 4
D
102 103anti-parallel
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There are 5 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
57 61first strand
Strand 2
E
46 51anti-parallel
Strand 3
F
43 48parallel
Strand 4
F
62 66anti-parallel
Strand 5
F
69 73anti-parallel
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There are 8 strands in AB8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
104 105first strand
Strand 2
E
242 245parallel
Strand 3
E
250 254anti-parallel
Strand 4
E
220 224anti-parallel
Strand 5
E
202 205anti-parallel
Strand 6
E
197 198anti-parallel
Strand 7
E
179 182anti-parallel
Strand 8
E
360 362anti-parallel
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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
143 145first strand
Strand 2
E
332 334anti-parallel
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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
159 160first strand
Strand 2
E
174 175anti-parallel
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There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
565 571first strand
Strand 2
E
574 579anti-parallel
Strand 3
E
601 605anti-parallel
Strand 4
E
589 590anti-parallel
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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
649 655first strand
Strand 2
E
640 645anti-parallel
Strand 3
E
681 685anti-parallel
Strand 4
E
691 694anti-parallel
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