Analysis of interatomic Contacts of Structural Units in PDB entry:
9Z3Z

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9Z3Z entry

There are 6 chains in PDB entry 9Z3Z (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LYS 33	ARG 1704
B	LYS 33	ALA 1706
C	ASP 3	GLY 151
D	LYS 3	ASP 171
E	ARG 13	ASP 171
F	ASP 3	GLY 151

There are126 helices in PDB entry 9Z3Z. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	74	76	Right-handed 310
Helix 2	AA2	A	89	93	Right-handed 310
Helix 3	AA3	A	97	110	Right-handed alpha
Helix 4	AA4	A	135	143	Right-handed alpha
Helix 5	AA5	A	153	169	Right-handed alpha
Helix 6	AA6	A	183	199	Right-handed alpha
Helix 7	AA7	A	200	205	Right-handed alpha
Helix 8	AA8	A	214	227	Right-handed alpha
Helix 9	AA9	A	281	286	Right-handed alpha
Helix 10	AB1	A	286	291	Right-handed alpha
Helix 11	AB2	A	292	299	Right-handed alpha
Helix 12	AB3	A	321	336	Right-handed alpha
Helix 13	AB4	A	339	354	Right-handed alpha
Helix 14	AB5	A	355	359	Right-handed 310
Helix 15	AB6	A	377	382	Right-handed alpha
Helix 16	AB7	A	388	397	Right-handed alpha
Helix 17	AB8	A	413	445	Right-handed alpha
Helix 18	AB9	A	470	492	Right-handed alpha
Helix 19	AC1	A	492	503	Right-handed alpha
Helix 20	AC2	A	516	521	Right-handed alpha
Helix 21	AC3	A	530	540	Right-handed alpha
Helix 22	AC4	A	545	557	Right-handed alpha
Helix 23	AC5	A	590	597	Right-handed alpha
Helix 24	AC6	A	600	609	Right-handed alpha
Helix 25	AC7	A	612	619	Right-handed alpha
Helix 26	AC8	A	626	631	Right-handed 310
Helix 27	AC9	A	652	669	Right-handed alpha
Helix 28	AD1	A	693	701	Right-handed alpha
Helix 29	AD2	A	703	714	Right-handed alpha
Helix 30	AD3	A	721	729	Right-handed alpha
Helix 31	AD4	A	730	732	Right-handed 310
Helix 32	AD5	A	742	754	Right-handed alpha
Helix 33	AD6	A	773	783	Right-handed alpha
Helix 34	AD7	A	786	829	Right-handed alpha
Helix 35	AD8	A	832	835	Right-handed 310
Helix 36	AD9	A	836	841	Right-handed alpha
Helix 37	AE1	A	844	852	Right-handed alpha
Helix 38	AE2	A	852	935	Right-handed alpha
Helix 39	AE3	A	935	990	Right-handed alpha
Helix 40	AE4	A	995	1030	Right-handed alpha
Helix 41	AE5	A	1274	1319	Right-handed alpha
Helix 42	AE6	A	1320	1324	Right-handed 310
Helix 43	AE7	A	1329	1516	Right-handed alpha
Helix 44	AE8	A	1517	1519	Right-handed 310
Helix 45	AE9	A	1531	1704	Right-handed alpha
Helix 46	AF1	B	81	85	Right-handed 310
Helix 47	AF2	B	89	93	Right-handed 310
Helix 48	AF3	B	97	111	Right-handed alpha
Helix 49	AF4	B	135	143	Right-handed alpha
Helix 50	AF5	B	153	169	Right-handed alpha
Helix 51	AF6	B	183	204	Right-handed alpha
Helix 52	AF7	B	205	208	Right-handed 310
Helix 53	AF8	B	209	221	Right-handed alpha
Helix 54	AF9	B	222	229	Right-handed alpha
Helix 55	AG1	B	267	272	Right-handed 310
Helix 56	AG2	B	281	290	Right-handed alpha
Helix 57	AG3	B	292	299	Right-handed alpha
Helix 58	AG4	B	321	336	Right-handed alpha
Helix 59	AG5	B	339	355	Right-handed alpha
Helix 60	AG6	B	375	386	Right-handed alpha
Helix 61	AG7	B	388	398	Right-handed alpha
Helix 62	AG8	B	413	445	Right-handed alpha
Helix 63	AG9	B	470	489	Right-handed alpha
Helix 64	AH1	B	493	503	Right-handed alpha
Helix 65	AH2	B	516	524	Right-handed alpha
Helix 66	AH3	B	530	540	Right-handed alpha
Helix 67	AH4	B	545	557	Right-handed alpha
Helix 68	AH5	B	590	597	Right-handed alpha
Helix 69	AH6	B	600	609	Right-handed alpha
Helix 70	AH7	B	612	619	Right-handed alpha
Helix 71	AH8	B	652	668	Right-handed alpha
Helix 72	AH9	B	669	671	Right-handed 310
Helix 73	AI1	B	691	702	Right-handed alpha
Helix 74	AI2	B	703	710	Right-handed alpha
Helix 75	AI3	B	711	713	Right-handed 310
Helix 76	AI4	B	721	729	Right-handed alpha
Helix 77	AI5	B	730	732	Right-handed 310
Helix 78	AI6	B	742	754	Right-handed alpha
Helix 79	AI7	B	757	759	Right-handed 310
Helix 80	AI8	B	775	829	Right-handed alpha
Helix 81	AI9	B	831	842	Right-handed alpha
Helix 82	AJ1	B	844	852	Right-handed alpha
Helix 83	AJ2	B	853	957	Right-handed alpha
Helix 84	AJ3	B	957	962	Right-handed alpha
Helix 85	AJ4	B	963	1032	Right-handed alpha
Helix 86	AJ5	B	1274	1336	Right-handed alpha
Helix 87	AJ6	B	1337	1452	Right-handed alpha
Helix 88	AJ7	B	1452	1523	Right-handed alpha
Helix 89	AJ8	B	1529	1706	Right-handed alpha
Helix 90	AJ9	C	5	19	Right-handed alpha
Helix 91	AK1	C	31	38	Right-handed alpha
Helix 92	AK2	C	44	52	Right-handed alpha
Helix 93	AK3	C	56	61	Right-handed alpha
Helix 94	AK4	C	66	79	Right-handed alpha
Helix 95	AK5	C	85	95	Right-handed alpha
Helix 96	AK6	C	106	116	Right-handed alpha
Helix 97	AK7	C	121	130	Right-handed alpha
Helix 98	AK8	C	141	150	Right-handed alpha
Helix 99	AK9	D	20	25	Right-handed alpha
Helix 100	AL1	D	26	41	Right-handed alpha
Helix 101	AL2	D	49	59	Right-handed alpha
Helix 102	AL3	D	65	74	Right-handed alpha
Helix 103	AL4	D	82	93	Right-handed alpha
Helix 104	AL5	D	98	108	Right-handed alpha
Helix 105	AL6	D	119	129	Right-handed alpha
Helix 106	AL7	D	134	144	Right-handed alpha
Helix 107	AL8	D	155	165	Right-handed alpha
Helix 108	AL9	E	18	23	Right-handed alpha
Helix 109	AM1	E	26	41	Right-handed alpha
Helix 110	AM2	E	49	59	Right-handed alpha
Helix 111	AM3	E	65	76	Right-handed alpha
Helix 112	AM4	E	82	94	Right-handed alpha
Helix 113	AM5	E	98	106	Right-handed alpha
Helix 114	AM6	E	107	110	Right-handed 310
Helix 115	AM7	E	118	127	Right-handed alpha
Helix 116	AM8	E	134	144	Right-handed alpha
Helix 117	AM9	E	155	165	Right-handed alpha
Helix 118	AN1	F	5	20	Right-handed alpha
Helix 119	AN2	F	28	39	Right-handed alpha
Helix 120	AN3	F	44	52	Right-handed alpha
Helix 121	AN4	F	56	60	Right-handed 310
Helix 122	AN5	F	67	79	Right-handed alpha
Helix 123	AN6	F	85	93	Right-handed alpha
Helix 124	AN7	F	106	116	Right-handed alpha
Helix 125	AN8	F	121	130	Right-handed alpha
Helix 126	AN9	F	140	150	Right-handed alpha

There are 21 sheets in PDB entry 9Z3Z. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	35	38	first strand
Strand 2	A	46	54	anti-parallel
Strand 3	A	57	62	anti-parallel
Strand 4	A	68	72	anti-parallel

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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	115	118	first strand
Strand 2	A	121	125	anti-parallel
Strand 3	A	672	679	parallel
Strand 4	A	172	177	parallel
Strand 5	A	453	459	parallel
Strand 6	A	242	250	anti-parallel
Strand 7	A	256	266	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	230	231	first strand
Strand 2	A	239	240	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	400	403	first strand
Strand 2	A	406	409	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	575	577	first strand
Strand 2	A	584	586	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	717	720	first strand
Strand 2	A	767	770	anti-parallel
Strand 3	A	761	763	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	35	39	first strand
Strand 2	B	45	49	anti-parallel

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There are 7 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	115	117	first strand
Strand 2	B	122	125	anti-parallel
Strand 3	B	672	679	parallel
Strand 4	B	172	178	parallel
Strand 5	B	455	459	parallel
Strand 6	B	243	250	anti-parallel
Strand 7	B	256	264	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	230	231	first strand
Strand 2	B	239	240	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	362	363	first strand
Strand 2	B	370	371	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	400	403	first strand
Strand 2	B	406	409	anti-parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	563	564	first strand
Strand 2	B	575	579	anti-parallel
Strand 3	B	582	586	anti-parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	717	720	first strand
Strand 2	B	767	770	anti-parallel
Strand 3	B	761	763	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	27	28	first strand
Strand 2	C	64	65	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	103	105	first strand
Strand 2	C	138	140	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	47	48	first strand
Strand 2	D	80	81	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	116	118	first strand
Strand 2	D	152	154	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	47	48	first strand
Strand 2	E	80	81	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	116	117	first strand
Strand 2	E	153	154	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	26	27	first strand
Strand 2	F	65	66	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	104	105	first strand
Strand 2	F	138	139	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9Z3Z

Analysis of interatomic Contacts of Structural Units in PDB entry:
9Z3Z