Analysis of interatomic Contacts of Structural Units in PDB entry:
9Z4O


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9Z4O entry

There is 1 chain in PDB entry 9Z4O (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 3HIS 496
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 9Z4O. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
4 9Right-handed alpha
Helix 2
AA2
A
10 35Right-handed alpha
Helix 3
AA3
A
76 81Right-handed alpha
Helix 4
AA4
A
169 173Right-handed 310
Helix 5
AA5
A
227 258Right-handed alpha
Helix 6
AA6
A
264 282Right-handed alpha
Helix 7
AA7
A
283 285Right-handed 310
Helix 8
AA8
A
286 291Right-handed alpha
Helix 9
AA9
A
295 322Right-handed alpha
Helix 10
AB1
A
335 349Right-handed alpha
Helix 11
AB2
A
350 360Right-handed alpha
Helix 12
AB3
A
367 370Right-handed 310
Helix 13
AB4
A
371 411Right-handed alpha
Helix 14
AB5
A
419 456Right-handed alpha
Helix 15
AB6
A
470 492Right-handed alpha
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There are 3 sheets in PDB entry 9Z4O. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
40 46first strand
Strand 2
A
215 226anti-parallel
Strand 3
A
110 119anti-parallel
Strand 4
A
182 187anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
48 51first strand
Strand 2
A
90 96anti-parallel
Strand 3
A
194 200anti-parallel
Strand 4
A
131 141anti-parallel
Strand 5
A
149 159anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
162 163first strand
Strand 2
A
178 179anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il