Analysis of interatomic Contacts of Structural Units in PDB entry:
9Z4X

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9Z4X entry

There are 3 chains in PDB entry 9Z4X (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLY 2	GLN 582
B	GLY 2	GLN 582
C	GLY 2	ILE 306

There are 95 helices in PDB entry 9Z4X. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	4	9	Right-handed alpha
Helix 2	AA2	A	15	29	Right-handed alpha
Helix 3	AA3	A	33	49	Right-handed alpha
Helix 4	AA4	A	82	101	Right-handed alpha
Helix 5	AA5	A	114	129	Right-handed alpha
Helix 6	AA6	A	142	149	Right-handed alpha
Helix 7	AA7	A	153	168	Right-handed alpha
Helix 8	AA8	A	211	217	Right-handed alpha
Helix 9	AA9	A	222	226	Right-handed 310
Helix 10	AB1	A	231	242	Right-handed alpha
Helix 11	AB2	A	253	271	Right-handed alpha
Helix 12	AB3	A	276	290	Right-handed alpha
Helix 13	AB4	A	297	313	Right-handed alpha
Helix 14	AB5	A	318	331	Right-handed alpha
Helix 15	AB6	A	333	349	Right-handed alpha
Helix 16	AB7	A	357	370	Right-handed alpha
Helix 17	AB8	A	370	384	Right-handed alpha
Helix 18	AB9	A	407	425	Right-handed alpha
Helix 19	AC1	A	433	447	Right-handed alpha
Helix 20	AC2	A	448	454	Right-handed alpha
Helix 21	AC3	A	555	561	Right-handed alpha
Helix 22	AC4	A	571	580	Right-handed alpha
Helix 23	AC5	B	4	9	Right-handed alpha
Helix 24	AC6	B	15	29	Right-handed alpha
Helix 25	AC7	B	33	50	Right-handed alpha
Helix 26	AC8	B	82	101	Right-handed alpha
Helix 27	AC9	B	102	106	Right-handed 310
Helix 28	AD1	B	114	128	Right-handed alpha
Helix 29	AD2	B	142	150	Right-handed alpha
Helix 30	AD3	B	153	168	Right-handed alpha
Helix 31	AD4	B	211	217	Right-handed alpha
Helix 32	AD5	B	222	226	Right-handed 310
Helix 33	AD6	B	231	242	Right-handed alpha
Helix 34	AD7	B	254	271	Right-handed alpha
Helix 35	AD8	B	276	290	Right-handed alpha
Helix 36	AD9	B	297	313	Right-handed alpha
Helix 37	AE1	B	318	331	Right-handed alpha
Helix 38	AE2	B	333	349	Right-handed alpha
Helix 39	AE3	B	357	370	Right-handed alpha
Helix 40	AE4	B	370	384	Right-handed alpha
Helix 41	AE5	B	406	425	Right-handed alpha
Helix 42	AE6	B	433	445	Right-handed alpha
Helix 43	AE7	B	448	454	Right-handed alpha
Helix 44	AE8	B	555	561	Right-handed alpha
Helix 45	AE9	B	561	567	Right-handed alpha
Helix 46	AF1	B	571	580	Right-handed alpha
Helix 47	AF2	C	4	9	Right-handed alpha
Helix 48	AF3	C	15	29	Right-handed alpha
Helix 49	AF4	C	33	50	Right-handed alpha
Helix 50	AF5	C	82	101	Right-handed alpha
Helix 51	AF6	C	114	129	Right-handed alpha
Helix 52	AF7	C	142	148	Right-handed alpha
Helix 53	AF8	C	153	168	Right-handed alpha
Helix 54	AF9	C	211	217	Right-handed alpha
Helix 55	AG1	C	222	226	Right-handed 310
Helix 56	AG2	C	231	242	Right-handed alpha
Helix 57	AG3	C	253	271	Right-handed alpha
Helix 58	AG4	C	276	290	Right-handed alpha
Helix 59	AG5	C	297	313	Right-handed alpha
Helix 60	AG6	C	318	331	Right-handed alpha
Helix 61	AG7	C	333	349	Right-handed alpha
Helix 62	AG8	C	357	370	Right-handed alpha
Helix 63	AG9	C	370	384	Right-handed alpha
Helix 64	AH1	C	406	425	Right-handed alpha
Helix 65	AH2	C	433	435	Right-handed 310
Helix 66	AH3	C	436	446	Right-handed alpha
Helix 67	AH4	C	448	455	Right-handed alpha
Helix 68	AH5	C	555	561	Right-handed alpha
Helix 69	AH6	C	561	567	Right-handed alpha
Helix 70	AH7	C	571	580	Right-handed alpha
Helix 71	AH8	D	4	9	Right-handed alpha
Helix 72	AH9	D	15	27	Right-handed alpha
Helix 73	AI1	D	33	49	Right-handed alpha
Helix 74	AI2	D	82	101	Right-handed alpha
Helix 75	AI3	D	102	106	Right-handed 310
Helix 76	AI4	D	108	112	Right-handed 310
Helix 77	AI5	D	114	129	Right-handed alpha
Helix 78	AI6	D	142	149	Right-handed alpha
Helix 79	AI7	D	153	169	Right-handed alpha
Helix 80	AI8	D	211	217	Right-handed alpha
Helix 81	AI9	D	222	226	Right-handed 310
Helix 82	AJ1	D	231	242	Right-handed alpha
Helix 83	AJ2	D	253	271	Right-handed alpha
Helix 84	AJ3	D	276	290	Right-handed alpha
Helix 85	AJ4	D	297	313	Right-handed alpha
Helix 86	AJ5	D	318	331	Right-handed alpha
Helix 87	AJ6	D	333	349	Right-handed alpha
Helix 88	AJ7	D	357	370	Right-handed alpha
Helix 89	AJ8	D	370	382	Right-handed alpha
Helix 90	AJ9	D	406	425	Right-handed alpha
Helix 91	AK1	D	433	446	Right-handed alpha
Helix 92	AK2	D	448	454	Right-handed alpha
Helix 93	AK3	D	555	560	Right-handed alpha
Helix 94	AK4	D	561	567	Right-handed alpha
Helix 95	AK5	D	571	580	Right-handed alpha

There are 14 sheets in PDB entry 9Z4X. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	63	67	first strand
Strand 2	A	75	79	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	192	194	first strand
Strand 2	A	182	186	anti-parallel
Strand 3	A	174	177	anti-parallel
Strand 4	A	228	229	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	246	248	first strand
Strand 2	A	251	252	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	456	457	first strand
Strand 2	A	550	551	parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	62	67	first strand
Strand 2	B	75	80	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	192	194	first strand
Strand 2	B	182	186	anti-parallel
Strand 3	B	174	177	anti-parallel
Strand 4	B	228	229	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	252	253	first strand
Strand 2	C	526	527	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	456	457	first strand
Strand 2	B	550	551	parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	63	67	first strand
Strand 2	C	75	79	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	192	194	first strand
Strand 2	C	182	186	anti-parallel
Strand 3	C	174	177	anti-parallel
Strand 4	C	228	229	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	456	457	first strand
Strand 2	C	550	551	parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	63	66	first strand
Strand 2	D	76	79	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	192	194	first strand
Strand 2	D	182	186	anti-parallel
Strand 3	D	174	177	anti-parallel
Strand 4	D	228	229	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	456	457	first strand
Strand 2	D	550	551	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9Z4X

Analysis of interatomic Contacts of Structural Units in PDB entry:
9Z4X