Analysis of interatomic Contacts of Structural Units in PDB entry:
9Z62


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9Z62 entry

There are 3 chains in PDB entry 9Z62 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 67CYS 585
B
 GLN 1SER 121
C
 ASP 1LYS 111
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 26 helices in PDB entry 9Z62. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
67 104Right-handed alpha
Helix 2
AA2
A
105 111Right-handed alpha
Helix 3
AA3
A
116 132Right-handed alpha
Helix 4
AA4
A
133 147Right-handed alpha
Helix 5
AA5
A
151 166Right-handed alpha
Helix 6
AA6
A
167 176Right-handed alpha
Helix 7
AA7
A
180 212Right-handed alpha
Helix 8
AA8
A
213 227Right-handed alpha
Helix 9
AA9
A
235 240Right-handed alpha
Helix 10
AB1
A
242 247Right-handed alpha
Helix 11
AB2
A
253 258Right-handed alpha
Helix 12
AB3
A
331 362Right-handed alpha
Helix 13
AB4
A
364 376Right-handed alpha
Helix 14
AB5
A
386 402Right-handed alpha
Helix 15
AB6
A
403 417Right-handed alpha
Helix 16
AB7
A
421 446Right-handed alpha
Helix 17
AB8
A
448 474Right-handed alpha
Helix 18
AB9
A
476 479Right-handed 310
Helix 19
AC1
A
480 496Right-handed alpha
Helix 20
AC2
A
497 509Right-handed alpha
Helix 21
AC3
A
509 522Right-handed alpha
Helix 22
AC4
A
522 550Right-handed alpha
Helix 23
AC5
A
556 560Right-handed 310
Helix 24
AC6
A
565 570Right-handed alpha
Helix 25
AC7
A
571 585Right-handed alpha
Helix 26
AC8
B
87 91Right-handed 310
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There are 6 sheets in PDB entry 9Z62. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
3 6first strand
Strand 2
B
17 25anti-parallel
Strand 3
B
78 84anti-parallel
Strand 4
B
68 73anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
10 12first strand
Strand 2
B
116 120parallel
Strand 3
B
92 98anti-parallel
Strand 4
B
34 39anti-parallel
Strand 5
B
45 52anti-parallel
Strand 6
B
57 60anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
10 12first strand
Strand 2
B
116 120parallel
Strand 3
B
92 98anti-parallel
Strand 4
B
111 112anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
4 7first strand
Strand 2
C
19 25anti-parallel
Strand 3
C
74 79anti-parallel
Strand 4
C
66 71anti-parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
10 14first strand
Strand 2
C
106 111parallel
Strand 3
C
89 94anti-parallel
Strand 4
C
37 42anti-parallel
Strand 5
C
49 53anti-parallel
Strand 6
C
57 58anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
30 31first strand
Strand 2
C
34 35anti-parallel
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