Analysis of interatomic Contacts of Structural Units in PDB entry:
9Z67

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9Z67 entry

There are 4 chains in PDB entry 9Z67 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASN 44	LYS 380
B	GLY 3	HIS 496
C	ASN 44	LYS 380
D	GLY 3	HIS 496

There are 48 helices in PDB entry 9Z67. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	45	51	Right-handed 310
Helix 2	AA2	A	76	86	Right-handed alpha
Helix 3	AA3	A	86	108	Right-handed alpha
Helix 4	AA4	A	124	130	Right-handed 310
Helix 5	AA5	A	132	156	Right-handed alpha
Helix 6	AA6	A	172	181	Right-handed alpha
Helix 7	AA7	A	186	198	Right-handed alpha
Helix 8	AA8	A	198	204	Right-handed alpha
Helix 9	AA9	A	210	234	Right-handed alpha
Helix 10	AB1	A	258	272	Right-handed alpha
Helix 11	AB2	A	334	339	Right-handed alpha
Helix 12	AB3	B	4	9	Right-handed alpha
Helix 13	AB4	B	10	35	Right-handed alpha
Helix 14	AB5	B	77	81	Right-handed 310
Helix 15	AB6	B	227	258	Right-handed alpha
Helix 16	AB7	B	264	282	Right-handed alpha
Helix 17	AB8	B	283	290	Right-handed 310
Helix 18	AB9	B	295	321	Right-handed alpha
Helix 19	AC1	B	331	334	Right-handed 310
Helix 20	AC2	B	335	361	Right-handed alpha
Helix 21	AC3	B	367	370	Right-handed 310
Helix 22	AC4	B	371	413	Right-handed alpha
Helix 23	AC5	B	418	456	Right-handed alpha
Helix 24	AC6	B	469	492	Right-handed alpha
Helix 25	AC7	C	45	51	Right-handed 310
Helix 26	AC8	C	76	86	Right-handed alpha
Helix 27	AC9	C	86	108	Right-handed alpha
Helix 28	AD1	C	124	130	Right-handed 310
Helix 29	AD2	C	132	156	Right-handed alpha
Helix 30	AD3	C	172	181	Right-handed alpha
Helix 31	AD4	C	186	198	Right-handed alpha
Helix 32	AD5	C	198	204	Right-handed alpha
Helix 33	AD6	C	210	234	Right-handed alpha
Helix 34	AD7	C	258	272	Right-handed alpha
Helix 35	AD8	C	334	339	Right-handed alpha
Helix 36	AD9	D	4	9	Right-handed alpha
Helix 37	AE1	D	10	35	Right-handed alpha
Helix 38	AE2	D	77	81	Right-handed 310
Helix 39	AE3	D	227	258	Right-handed alpha
Helix 40	AE4	D	264	282	Right-handed alpha
Helix 41	AE5	D	283	290	Right-handed 310
Helix 42	AE6	D	295	321	Right-handed alpha
Helix 43	AE7	D	331	334	Right-handed 310
Helix 44	AE8	D	335	361	Right-handed alpha
Helix 45	AE9	D	367	370	Right-handed 310
Helix 46	AF1	D	371	413	Right-handed alpha
Helix 47	AF2	D	418	456	Right-handed alpha
Helix 48	AF3	D	469	492	Right-handed alpha

There are 14 sheets in PDB entry 9Z67. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	235	241	first strand
Strand 2	A	249	255	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	284	286	first strand
Strand 2	A	274	278	anti-parallel
Strand 3	A	300	301	parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	324	325	first strand
Strand 2	A	369	379	anti-parallel
Strand 3	A	344	354	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	40	46	first strand
Strand 2	B	215	226	anti-parallel
Strand 3	B	110	119	anti-parallel
Strand 4	B	182	187	anti-parallel

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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	73	74	first strand
Strand 2	B	48	51	anti-parallel
Strand 3	B	90	95	anti-parallel
Strand 4	B	194	200	anti-parallel
Strand 5	B	131	141	anti-parallel
Strand 6	B	149	159	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	162	163	first strand
Strand 2	B	178	179	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	459	462	first strand
Strand 2	B	465	468	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	235	241	first strand
Strand 2	C	249	255	anti-parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	284	286	first strand
Strand 2	C	274	278	anti-parallel
Strand 3	C	300	301	parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	324	325	first strand
Strand 2	C	369	379	anti-parallel
Strand 3	C	344	354	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	40	46	first strand
Strand 2	D	215	226	anti-parallel
Strand 3	D	110	119	anti-parallel
Strand 4	D	182	187	anti-parallel

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There are 6 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	73	74	first strand
Strand 2	D	48	51	anti-parallel
Strand 3	D	90	95	anti-parallel
Strand 4	D	194	200	anti-parallel
Strand 5	D	131	141	anti-parallel
Strand 6	D	149	159	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	162	163	first strand
Strand 2	D	178	179	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	459	462	first strand
Strand 2	D	465	468	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9Z67

Analysis of interatomic Contacts of Structural Units in PDB entry:
9Z67