Analysis of interatomic Contacts of Structural Units in PDB entry:
9Z6X

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9Z6X entry

There are 4 chains in PDB entry 9Z6X (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	VAL 260	GLU 541
C	VAL 260	GLU 541
B	VAL 260	GLU 541
D	VAL 260	GLU 541

There are 34 helices in PDB entry 9Z6X. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	272	278	Right-handed alpha
Helix 2	AA2	A	278	292	Right-handed alpha
Helix 3	AA3	A	306	317	Right-handed alpha
Helix 4	AA4	A	320	325	Right-handed alpha
Helix 5	AA5	A	433	438	Right-handed 310
Helix 6	AA6	A	455	457	Right-handed 310
Helix 7	AA7	A	458	464	Right-handed alpha
Helix 8	AA8	A	497	500	Right-handed 310
Helix 9	AA9	C	272	278	Right-handed alpha
Helix 10	AB1	C	278	292	Right-handed alpha
Helix 11	AB2	C	305	317	Right-handed alpha
Helix 12	AB3	C	320	325	Right-handed alpha
Helix 13	AB4	C	359	361	Right-handed 310
Helix 14	AB5	C	431	437	Right-handed alpha
Helix 15	AB6	C	438	440	Right-handed 310
Helix 16	AB7	C	455	457	Right-handed 310
Helix 17	AB8	C	458	464	Right-handed alpha
Helix 18	AB9	C	497	500	Right-handed 310
Helix 19	AC1	B	272	278	Right-handed alpha
Helix 20	AC2	B	278	292	Right-handed alpha
Helix 21	AC3	B	306	317	Right-handed alpha
Helix 22	AC4	B	320	325	Right-handed alpha
Helix 23	AC5	B	359	361	Right-handed 310
Helix 24	AC6	B	458	464	Right-handed alpha
Helix 25	AC7	B	497	500	Right-handed 310
Helix 26	AC8	D	272	278	Right-handed alpha
Helix 27	AC9	D	278	292	Right-handed alpha
Helix 28	AD1	D	305	317	Right-handed alpha
Helix 29	AD2	D	320	325	Right-handed alpha
Helix 30	AD3	D	359	361	Right-handed 310
Helix 31	AD4	D	429	433	Right-handed 310
Helix 32	AD5	D	455	457	Right-handed 310
Helix 33	AD6	D	458	464	Right-handed alpha
Helix 34	AD7	D	497	500	Right-handed 310

There are 9 sheets in PDB entry 9Z6X. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	333	337	first strand
Strand 2	A	351	357	anti-parallel
Strand 3	A	296	302	anti-parallel
Strand 4	A	261	266	parallel
Strand 5	A	534	538	anti-parallel
Strand 6	A	502	508	anti-parallel

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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	364	368	first strand
Strand 2	A	387	392	anti-parallel
Strand 3	A	397	404	anti-parallel
Strand 4	A	443	448	parallel
Strand 5	A	490	495	anti-parallel
Strand 6	A	466	468	anti-parallel

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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	333	337	first strand
Strand 2	C	353	357	anti-parallel
Strand 3	C	296	300	anti-parallel
Strand 4	C	261	267	parallel
Strand 5	C	534	538	anti-parallel
Strand 6	C	502	508	anti-parallel

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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	364	366	first strand
Strand 2	C	387	392	anti-parallel
Strand 3	C	397	404	anti-parallel
Strand 4	C	443	448	parallel
Strand 5	C	490	495	anti-parallel
Strand 6	C	466	468	anti-parallel

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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	333	337	first strand
Strand 2	B	352	357	anti-parallel
Strand 3	B	296	300	anti-parallel
Strand 4	B	261	267	parallel
Strand 5	B	534	538	anti-parallel
Strand 6	B	502	508	anti-parallel

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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	364	368	first strand
Strand 2	B	387	392	anti-parallel
Strand 3	B	397	404	anti-parallel
Strand 4	B	443	448	parallel
Strand 5	B	490	495	anti-parallel
Strand 6	B	466	468	anti-parallel

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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	333	337	first strand
Strand 2	D	353	357	anti-parallel
Strand 3	D	296	299	anti-parallel
Strand 4	D	261	266	parallel
Strand 5	D	534	538	anti-parallel
Strand 6	D	502	508	anti-parallel

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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	364	366	first strand
Strand 2	D	387	392	anti-parallel
Strand 3	D	397	404	anti-parallel
Strand 4	D	443	448	parallel
Strand 5	D	490	495	anti-parallel
Strand 6	D	466	468	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	519	520	first strand
Strand 2	D	523	524	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9Z6X

Analysis of interatomic Contacts of Structural Units in PDB entry:
9Z6X