Analysis of interatomic Contacts of Structural Units in PDB entry:
9Z73

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9Z73 entry

There are 4 chains in PDB entry 9Z73 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ALA 1	LEU 183
B	LYS 2	LEU 183
C	LYS 2	LEU 183
D	ALA 1	LYS 105

There are 40 helices in PDB entry 9Z73. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	10	15	Right-handed alpha
Helix 2	AA2	A	21	38	Right-handed alpha
Helix 3	AA3	A	57	63	Right-handed alpha
Helix 4	AA4	A	63	71	Right-handed alpha
Helix 5	AA5	A	84	98	Right-handed alpha
Helix 6	AA6	A	118	132	Right-handed alpha
Helix 7	AA7	A	135	144	Right-handed alpha
Helix 8	AA8	A	146	160	Right-handed alpha
Helix 9	AA9	B	10	15	Right-handed alpha
Helix 10	AB1	B	21	38	Right-handed alpha
Helix 11	AB2	B	57	63	Right-handed alpha
Helix 12	AB3	B	63	71	Right-handed alpha
Helix 13	AB4	B	84	98	Right-handed alpha
Helix 14	AB5	B	118	132	Right-handed alpha
Helix 15	AB6	B	135	144	Right-handed alpha
Helix 16	AB7	B	146	160	Right-handed alpha
Helix 17	AB8	C	10	15	Right-handed alpha
Helix 18	AB9	C	21	39	Right-handed alpha
Helix 19	AC1	C	57	63	Right-handed alpha
Helix 20	AC2	C	63	71	Right-handed alpha
Helix 21	AC3	C	84	99	Right-handed alpha
Helix 22	AC4	C	118	132	Right-handed alpha
Helix 23	AC5	C	135	144	Right-handed alpha
Helix 24	AC6	C	146	160	Right-handed alpha
Helix 25	AC7	D	10	15	Right-handed alpha
Helix 26	AC8	D	21	39	Right-handed alpha
Helix 27	AC9	D	57	63	Right-handed alpha
Helix 28	AD1	D	63	71	Right-handed alpha
Helix 29	AD2	D	84	98	Right-handed alpha
Helix 30	AD3	D	118	132	Right-handed alpha
Helix 31	AD4	D	135	144	Right-handed alpha
Helix 32	AD5	D	146	160	Right-handed alpha
Helix 33	AD6	E	10	15	Right-handed alpha
Helix 34	AD7	E	21	39	Right-handed alpha
Helix 35	AD8	E	57	63	Right-handed alpha
Helix 36	AD9	E	63	71	Right-handed alpha
Helix 37	AE1	E	84	99	Right-handed alpha
Helix 38	AE2	E	118	132	Right-handed alpha
Helix 39	AE3	E	135	144	Right-handed alpha
Helix 40	AE4	E	146	160	Right-handed alpha

There are 15 sheets in PDB entry 9Z73. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	5	9	first strand
Strand 2	A	44	48	parallel
Strand 3	A	76	80	parallel
Strand 4	A	102	105	parallel
Strand 5	A	110	113	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	18	19	first strand
Strand 2	A	54	55	parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	133	134	first strand
Strand 2	A	175	181	anti-parallel
Strand 3	A	163	169	anti-parallel

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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	5	9	first strand
Strand 2	B	44	48	parallel
Strand 3	B	76	80	parallel
Strand 4	B	102	105	parallel
Strand 5	B	110	113	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	18	19	first strand
Strand 2	B	54	55	parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	133	134	first strand
Strand 2	B	175	181	anti-parallel
Strand 3	B	163	169	anti-parallel

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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	5	9	first strand
Strand 2	C	44	48	parallel
Strand 3	C	76	80	parallel
Strand 4	C	102	105	parallel
Strand 5	C	110	113	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	18	19	first strand
Strand 2	C	54	55	parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	133	134	first strand
Strand 2	C	177	181	anti-parallel
Strand 3	C	163	167	anti-parallel

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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	5	9	first strand
Strand 2	D	44	48	parallel
Strand 3	D	76	80	parallel
Strand 4	D	102	105	parallel
Strand 5	D	110	113	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	18	19	first strand
Strand 2	D	54	55	parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	133	134	first strand
Strand 2	D	175	181	anti-parallel
Strand 3	D	163	169	anti-parallel

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There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	5	9	first strand
Strand 2	E	44	48	parallel
Strand 3	E	76	80	parallel
Strand 4	E	102	106	parallel
Strand 5	E	109	113	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	18	19	first strand
Strand 2	E	54	55	parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	133	134	first strand
Strand 2	E	176	181	anti-parallel
Strand 3	E	163	168	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9Z73

Analysis of interatomic Contacts of Structural Units in PDB entry:
9Z73