Analysis of interatomic Contacts of Structural Units in PDB entry:
9Z77

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9Z77 entry

There are 3 chains in PDB entry 9Z77 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASN 4	THR 942
B	GLU 1	LYS 229
C	TYR 5	PRO 213

There are 8 helices in PDB entry 9Z77. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	8	17	Right-handed alpha
Helix 2	AA2	A	245	250	Right-handed alpha
Helix 3	AA3	A	252	256	Right-handed alpha
Helix 4	AA4	A	550	557	Right-handed alpha
Helix 5	AA5	B	64	68	Right-handed 310
Helix 6	AA6	C	29	31	Right-handed 310
Helix 7	AA7	C	126	131	Right-handed alpha
Helix 8	AA8	C	186	192	Right-handed alpha

There are 29 sheets in PDB entry 9Z77. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	29	31	first strand
Strand 2	A	40	42	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	66	67	first strand
Strand 2	A	72	75	anti-parallel
Strand 3	A	108	112	anti-parallel
Strand 4	A	93	100	anti-parallel
Strand 5	A	84	86	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	143	145	first strand
Strand 2	A	173	175	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	179	181	first strand
Strand 2	A	186	189	anti-parallel
Strand 3	A	239	243	anti-parallel
Strand 4	A	224	233	anti-parallel
Strand 5	A	214	219	anti-parallel

Back to list of sheets
Back to top of page

There are 8 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	257	261	first strand
Strand 2	A	305	308	parallel
Strand 3	A	328	330	parallel
Strand 4	A	349	351	parallel
Strand 5	A	369	372	parallel
Strand 6	A	389	391	parallel
Strand 7	A	414	416	parallel
Strand 8	A	436	438	parallel

Back to list of sheets
Back to top of page

There are 12 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	290	293	first strand
Strand 2	A	280	284	anti-parallel
Strand 3	A	270	274	anti-parallel
Strand 4	A	313	317	parallel
Strand 5	A	334	337	parallel
Strand 6	A	356	360	parallel
Strand 7	A	376	379	parallel
Strand 8	A	395	398	parallel
Strand 9	A	422	424	parallel
Strand 10	A	443	445	parallel
Strand 11	A	464	466	parallel
Strand 12	A	568	569	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	321	322	first strand
Strand 2	A	344	345	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	401	402	first strand
Strand 2	A	382	384	parallel
Strand 3	A	408	409	parallel

Back to list of sheets
Back to top of page

There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	453	454	first strand
Strand 2	A	474	478	parallel
Strand 3	A	573	577	parallel
Strand 4	A	598	602	parallel
Strand 5	A	632	640	parallel
Strand 6	A	592	593	parallel

Back to list of sheets
Back to top of page

There are 10 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	453	454	first strand
Strand 2	A	474	478	parallel
Strand 3	A	573	577	parallel
Strand 4	A	598	602	parallel
Strand 5	A	632	640	parallel
Strand 6	A	653	659	parallel
Strand 7	A	705	708	parallel
Strand 8	A	723	726	parallel
Strand 9	A	743	746	parallel
Strand 10	A	764	766	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	607	608	first strand
Strand 2	A	645	646	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	611	612	first strand
Strand 2	A	627	628	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	664	666	first strand
Strand 2	A	712	715	parallel
Strand 3	A	729	732	parallel
Strand 4	A	749	752	parallel
Strand 5	A	771	772	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	719	720	first strand
Strand 2	A	737	739	parallel
Strand 3	A	758	760	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	802	803	first strand
Strand 2	A	822	823	parallel
Strand 3	A	863	864	parallel

Back to list of sheets
Back to top of page

There are 6 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	809	810	first strand
Strand 2	A	830	831	parallel
Strand 3	A	869	871	parallel
Strand 4	A	887	891	parallel
Strand 5	A	910	914	parallel
Strand 6	A	936	937	parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	817	819	first strand
Strand 2	A	857	860	parallel
Strand 3	A	875	878	parallel
Strand 4	A	894	896	parallel
Strand 5	A	917	919	parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	3	5	first strand
Strand 2	B	20	25	anti-parallel
Strand 3	B	81	86	anti-parallel
Strand 4	B	71	73	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	10	11	first strand
Strand 2	B	122	125	parallel
Strand 3	B	95	99	anti-parallel
Strand 4	B	35	40	anti-parallel
Strand 5	B	44	50	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	135	139	first strand
Strand 2	B	154	160	anti-parallel
Strand 3	B	191	197	anti-parallel
Strand 4	B	178	180	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	135	139	first strand
Strand 2	B	154	160	anti-parallel
Strand 3	B	191	197	anti-parallel
Strand 4	B	184	185	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	166	169	first strand
Strand 2	B	209	215	anti-parallel
Strand 3	B	220	226	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	7	8	first strand
Strand 2	C	20	27	anti-parallel
Strand 3	C	72	78	anti-parallel
Strand 4	C	65	69	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	12	15	first strand
Strand 2	C	106	110	parallel
Strand 3	C	86	93	anti-parallel
Strand 4	C	35	40	anti-parallel
Strand 5	C	47	51	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	12	15	first strand
Strand 2	C	106	110	parallel
Strand 3	C	86	93	anti-parallel
Strand 4	C	100	102	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	119	123	first strand
Strand 2	C	136	144	anti-parallel
Strand 3	C	177	184	anti-parallel
Strand 4	C	164	166	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	119	123	first strand
Strand 2	C	136	144	anti-parallel
Strand 3	C	177	184	anti-parallel
Strand 4	C	170	171	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	150	154	first strand
Strand 2	C	196	202	anti-parallel
Strand 3	C	205	207	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	150	154	first strand
Strand 2	C	196	202	anti-parallel
Strand 3	C	210	211	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9Z77

Analysis of interatomic Contacts of Structural Units in PDB entry:
9Z77