Analysis of interatomic Contacts of Structural Units in PDB entry:
9Z7O

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9Z7O entry

There are 8 chains in PDB entry 9Z7O (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ALA 1	ASP 116
B	LEU -5	ASP 116
C	MET 1	ASN 203
D	MET 1	ASN 203
E	ALA 1	ASP 116
F	LEU -5	ASP 116
G	MET 1	ASN 203
H	MET 1	ASN 203

There are 68 helices in PDB entry 9Z7O. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	5	9	Right-handed alpha
Helix 2	AA2	A	15	32	Right-handed alpha
Helix 3	AA3	A	47	55	Right-handed alpha
Helix 4	AA4	A	57	62	Right-handed alpha
Helix 5	AA5	A	63	70	Right-handed alpha
Helix 6	AA6	A	77	97	Right-handed alpha
Helix 7	AA7	A	97	115	Right-handed alpha
Helix 8	AA8	B	5	9	Right-handed alpha
Helix 9	AA9	B	15	32	Right-handed alpha
Helix 10	AB1	B	47	55	Right-handed alpha
Helix 11	AB2	B	57	62	Right-handed alpha
Helix 12	AB3	B	63	70	Right-handed alpha
Helix 13	AB4	B	77	97	Right-handed alpha
Helix 14	AB5	B	97	115	Right-handed alpha
Helix 15	AB6	C	28	37	Right-handed alpha
Helix 16	AB7	C	42	47	Right-handed 310
Helix 17	AB8	C	48	61	Right-handed alpha
Helix 18	AB9	C	69	92	Right-handed alpha
Helix 19	AC1	C	96	104	Right-handed alpha
Helix 20	AC2	C	104	126	Right-handed alpha
Helix 21	AC3	C	134	145	Right-handed alpha
Helix 22	AC4	C	151	165	Right-handed alpha
Helix 23	AC5	C	173	179	Right-handed 310
Helix 24	AC6	C	188	198	Right-handed alpha
Helix 25	AC7	D	28	37	Right-handed alpha
Helix 26	AC8	D	42	47	Right-handed 310
Helix 27	AC9	D	48	61	Right-handed alpha
Helix 28	AD1	D	69	92	Right-handed alpha
Helix 29	AD2	D	96	104	Right-handed alpha
Helix 30	AD3	D	104	126	Right-handed alpha
Helix 31	AD4	D	134	145	Right-handed alpha
Helix 32	AD5	D	151	165	Right-handed alpha
Helix 33	AD6	D	173	179	Right-handed 310
Helix 34	AD7	D	188	198	Right-handed alpha
Helix 35	AD8	E	5	9	Right-handed alpha
Helix 36	AD9	E	15	32	Right-handed alpha
Helix 37	AE1	E	47	55	Right-handed alpha
Helix 38	AE2	E	57	62	Right-handed alpha
Helix 39	AE3	E	63	70	Right-handed alpha
Helix 40	AE4	E	77	97	Right-handed alpha
Helix 41	AE5	E	97	115	Right-handed alpha
Helix 42	AE6	F	5	9	Right-handed alpha
Helix 43	AE7	F	15	32	Right-handed alpha
Helix 44	AE8	F	47	55	Right-handed alpha
Helix 45	AE9	F	57	62	Right-handed alpha
Helix 46	AF1	F	63	70	Right-handed alpha
Helix 47	AF2	F	77	97	Right-handed alpha
Helix 48	AF3	F	97	115	Right-handed alpha
Helix 49	AF4	G	28	37	Right-handed alpha
Helix 50	AF5	G	42	47	Right-handed 310
Helix 51	AF6	G	48	61	Right-handed alpha
Helix 52	AF7	G	69	92	Right-handed alpha
Helix 53	AF8	G	96	104	Right-handed alpha
Helix 54	AF9	G	104	126	Right-handed alpha
Helix 55	AG1	G	134	145	Right-handed alpha
Helix 56	AG2	G	151	165	Right-handed alpha
Helix 57	AG3	G	173	179	Right-handed 310
Helix 58	AG4	G	188	198	Right-handed alpha
Helix 59	AG5	H	28	37	Right-handed alpha
Helix 60	AG6	H	42	47	Right-handed 310
Helix 61	AG7	H	48	61	Right-handed alpha
Helix 62	AG8	H	69	92	Right-handed alpha
Helix 63	AG9	H	96	104	Right-handed alpha
Helix 64	AH1	H	104	126	Right-handed alpha
Helix 65	AH2	H	134	145	Right-handed alpha
Helix 66	AH3	H	151	165	Right-handed alpha
Helix 67	AH4	H	173	179	Right-handed 310
Helix 68	AH5	H	188	198	Right-handed alpha

There are 14 sheets in PDB entry 9Z7O. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2	4	first strand
Strand 2	A	36	39	parallel
Strand 3	A	71	74	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	12	13	first strand
Strand 2	A	45	46	parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	0	4	first strand
Strand 2	B	35	39	parallel
Strand 3	B	71	74	parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	12	13	first strand
Strand 2	B	45	46	parallel

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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	10	13	first strand
Strand 2	C	183	186	parallel
Strand 3	C	168	170	parallel
Strand 4	C	24	27	parallel
Strand 5	C	64	68	parallel
Strand 6	C	128	129	parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	131	133	first strand
Strand 2	D	131	133	anti-parallel

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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	10	13	first strand
Strand 2	D	183	186	parallel
Strand 3	D	168	170	parallel
Strand 4	D	24	27	parallel
Strand 5	D	64	68	parallel
Strand 6	D	128	129	parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	2	4	first strand
Strand 2	E	36	39	parallel
Strand 3	E	71	74	parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	12	13	first strand
Strand 2	E	45	46	parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	0	4	first strand
Strand 2	F	35	39	parallel
Strand 3	F	71	74	parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	12	13	first strand
Strand 2	F	45	46	parallel

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There are 6 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	10	13	first strand
Strand 2	G	183	186	parallel
Strand 3	G	168	170	parallel
Strand 4	G	24	27	parallel
Strand 5	G	64	68	parallel
Strand 6	G	128	129	parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	131	133	first strand
Strand 2	H	131	133	anti-parallel

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There are 6 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	10	13	first strand
Strand 2	H	183	186	parallel
Strand 3	H	168	170	parallel
Strand 4	H	24	27	parallel
Strand 5	H	64	68	parallel
Strand 6	H	128	129	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9Z7O

Analysis of interatomic Contacts of Structural Units in PDB entry:
9Z7O