Analysis of interatomic Contacts of Structural Units in PDB entry:
9ZAU

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9ZAU entry

There are 2 chains in PDB entry 9ZAU (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LYS 47	VAL 610
B	LYS 47	LYS 608

There are 38 helices in PDB entry 9ZAU. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	71	88	Right-handed alpha
Helix 2	AA2	A	95	101	Right-handed 310
Helix 3	AA3	A	116	120	Right-handed 310
Helix 4	AA4	A	121	131	Right-handed alpha
Helix 5	AA5	A	144	146	Right-handed 310
Helix 6	AA6	A	147	152	Right-handed alpha
Helix 7	AA7	A	227	233	Right-handed 310
Helix 8	AA8	A	234	243	Right-handed alpha
Helix 9	AA9	A	282	290	Right-handed alpha
Helix 10	AB1	A	290	303	Right-handed alpha
Helix 11	AB2	A	329	342	Right-handed alpha
Helix 12	AB3	A	365	369	Right-handed 310
Helix 13	AB4	A	375	394	Right-handed alpha
Helix 14	AB5	A	404	408	Right-handed 310
Helix 15	AB6	A	410	421	Right-handed alpha
Helix 16	AB7	A	466	481	Right-handed alpha
Helix 17	AB8	A	494	499	Right-handed alpha
Helix 18	AB9	A	502	521	Right-handed alpha
Helix 19	AC1	A	528	542	Right-handed alpha
Helix 20	AC2	B	71	88	Right-handed alpha
Helix 21	AC3	B	95	99	Right-handed 310
Helix 22	AC4	B	116	120	Right-handed 310
Helix 23	AC5	B	121	131	Right-handed alpha
Helix 24	AC6	B	144	146	Right-handed 310
Helix 25	AC7	B	147	152	Right-handed alpha
Helix 26	AC8	B	227	233	Right-handed 310
Helix 27	AC9	B	234	243	Right-handed alpha
Helix 28	AD1	B	282	290	Right-handed alpha
Helix 29	AD2	B	290	303	Right-handed alpha
Helix 30	AD3	B	330	343	Right-handed alpha
Helix 31	AD4	B	365	369	Right-handed 310
Helix 32	AD5	B	375	394	Right-handed alpha
Helix 33	AD6	B	404	408	Right-handed 310
Helix 34	AD7	B	410	421	Right-handed alpha
Helix 35	AD8	B	466	481	Right-handed alpha
Helix 36	AD9	B	488	493	Right-handed 310
Helix 37	AE1	B	502	521	Right-handed alpha
Helix 38	AE2	B	528	542	Right-handed alpha

There are 17 sheets in PDB entry 9ZAU. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	48	50	first strand
Strand 2	A	552	561	anti-parallel
Strand 3	A	543	549	anti-parallel
Strand 4	A	59	60	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	48	50	first strand
Strand 2	A	552	561	anti-parallel
Strand 3	A	602	606	anti-parallel

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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	91	93	first strand
Strand 2	A	62	67	parallel
Strand 3	A	108	113	parallel
Strand 4	A	134	137	parallel
Strand 5	A	219	224	parallel
Strand 6	A	208	216	anti-parallel
Strand 7	A	199	205	anti-parallel
Strand 8	A	166	167	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	153	163	first strand
Strand 2	A	186	194	anti-parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	248	253	first strand
Strand 2	A	565	570	anti-parallel
Strand 3	A	593	597	anti-parallel
Strand 4	A	584	590	anti-parallel
Strand 5	A	579	581	anti-parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	346	351	first strand
Strand 2	A	306	311	parallel
Strand 3	A	256	261	parallel
Strand 4	A	482	487	parallel
Strand 5	A	460	461	parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	346	351	first strand
Strand 2	A	306	311	parallel
Strand 3	A	256	261	parallel
Strand 4	A	525	526	parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	401	402	first strand
Strand 2	A	426	427	parallel
Strand 3	A	454	455	parallel
Strand 4	A	445	446	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	574	575	first strand
Strand 2	A	608	609	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	48	50	first strand
Strand 2	B	552	561	anti-parallel
Strand 3	B	543	548	anti-parallel
Strand 4	B	59	60	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	48	50	first strand
Strand 2	B	552	561	anti-parallel
Strand 3	B	602	606	anti-parallel

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There are 8 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	91	93	first strand
Strand 2	B	62	67	parallel
Strand 3	B	108	113	parallel
Strand 4	B	134	137	parallel
Strand 5	B	219	224	parallel
Strand 6	B	208	216	anti-parallel
Strand 7	B	199	205	anti-parallel
Strand 8	B	166	167	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	153	163	first strand
Strand 2	B	186	194	anti-parallel

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There are 5 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	248	253	first strand
Strand 2	B	565	570	anti-parallel
Strand 3	B	593	598	anti-parallel
Strand 4	B	584	590	anti-parallel
Strand 5	B	579	581	anti-parallel

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There are 5 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	346	351	first strand
Strand 2	B	306	311	parallel
Strand 3	B	256	262	parallel
Strand 4	B	482	487	parallel
Strand 5	B	460	461	parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	346	351	first strand
Strand 2	B	306	311	parallel
Strand 3	B	256	262	parallel
Strand 4	B	525	526	parallel

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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	401	402	first strand
Strand 2	B	426	427	parallel
Strand 3	B	454	455	parallel
Strand 4	B	445	446	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9ZAU

Analysis of interatomic Contacts of Structural Units in PDB entry:
9ZAU