Analysis of interatomic Contacts of Structural Units in PDB entry:
9ZB0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9ZB0 entry

There are 2 chains in PDB entry 9ZB0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 96ASN 445
B
 LEU 99ASN 445
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 32 helices in PDB entry 9ZB0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
116 129Right-handed alpha
Helix 2
AA2
A
145 154Right-handed alpha
Helix 3
AA3
A
155 159Right-handed 310
Helix 4
AA4
A
173 178Right-handed 310
Helix 5
AA5
A
179 199Right-handed alpha
Helix 6
AA6
A
217 232Right-handed alpha
Helix 7
AA7
A
246 250Right-handed 310
Helix 8
AA8
A
273 280Right-handed alpha
Helix 9
AA9
A
281 283Right-handed 310
Helix 10
AB1
A
287 292Right-handed alpha
Helix 11
AB2
A
294 299Right-handed alpha
Helix 12
AB3
A
340 344Right-handed 310
Helix 13
AB4
A
346 349Right-handed 310
Helix 14
AB5
A
350 365Right-handed alpha
Helix 15
AB6
A
369 375Right-handed alpha
Helix 16
AB7
A
390 402Right-handed alpha
Helix 17
AB8
B
117 129Right-handed alpha
Helix 18
AB9
B
145 154Right-handed alpha
Helix 19
AC1
B
155 159Right-handed 310
Helix 20
AC2
B
173 178Right-handed 310
Helix 21
AC3
B
179 198Right-handed alpha
Helix 22
AC4
B
217 232Right-handed alpha
Helix 23
AC5
B
246 250Right-handed 310
Helix 24
AC6
B
273 280Right-handed alpha
Helix 25
AC7
B
281 283Right-handed 310
Helix 26
AC8
B
287 293Right-handed alpha
Helix 27
AC9
B
294 299Right-handed alpha
Helix 28
AD1
B
340 344Right-handed 310
Helix 29
AD2
B
346 349Right-handed 310
Helix 30
AD3
B
350 365Right-handed alpha
Helix 31
AD4
B
369 375Right-handed alpha
Helix 32
AD5
B
390 402Right-handed alpha
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There are 8 sheets in PDB entry 9ZB0. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
160 163first strand
Strand 2
A
137 141parallel
Strand 3
A
108 112parallel
Strand 4
A
204 209parallel
Strand 5
A
269 272anti-parallel
Strand 6
A
235 239anti-parallel
Strand 7
A
302 306parallel
Strand 8
A
258 261anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
212 214first strand
Strand 2
A
311 313anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
383 387first strand
Strand 2
A
427 432parallel
Strand 3
A
420 424anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
407 408first strand
Strand 2
A
411 412anti-parallel
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There are 8 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
160 163first strand
Strand 2
B
137 141parallel
Strand 3
B
108 112parallel
Strand 4
B
204 209parallel
Strand 5
B
269 272anti-parallel
Strand 6
B
235 239anti-parallel
Strand 7
B
302 306parallel
Strand 8
B
258 261anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
212 214first strand
Strand 2
B
311 313anti-parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
383 387first strand
Strand 2
B
427 432parallel
Strand 3
B
420 424anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
407 408first strand
Strand 2
B
411 412anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il