Analysis of interatomic Contacts of Structural Units in PDB entry:
9ZBJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9ZBJ entry

There are 4 chains in PDB entry 9ZBJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
GLN 203TRP 2549
B
THR 7SER 323
C
GLU 23ALA 1694
D
MET 1GLN 148
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are208 helices in PDB entry 9ZBJ. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
203 224Right-handed alpha
Helix 2
AA2
A
234 245Right-handed alpha
Helix 3
AA3
A
258 274Right-handed alpha
Helix 4
AA4
A
279 290Right-handed alpha
Helix 5
AA5
A
361 368Right-handed alpha
Helix 6
AA6
A
371 382Right-handed alpha
Helix 7
AA7
A
385 395Right-handed alpha
Helix 8
AA8
A
395 401Right-handed alpha
Helix 9
AA9
A
403 409Right-handed alpha
Helix 10
AB1
A
413 423Right-handed alpha
Helix 11
AB2
A
426 428Right-handed 310
Helix 12
AB3
A
429 444Right-handed alpha
Helix 13
AB4
A
444 449Right-handed alpha
Helix 14
AB5
A
451 460Right-handed alpha
Helix 15
AB6
A
462 467Right-handed alpha
Helix 16
AB7
A
477 494Right-handed alpha
Helix 17
AB8
A
497 512Right-handed alpha
Helix 18
AB9
A
514 528Right-handed alpha
Helix 19
AC1
A
531 547Right-handed alpha
Helix 20
AC2
A
578 592Right-handed alpha
Helix 21
AC3
A
599 610Right-handed alpha
Helix 22
AC4
A
615 629Right-handed alpha
Helix 23
AC5
A
630 636Right-handed alpha
Helix 24
AC6
A
647 665Right-handed alpha
Helix 25
AC7
A
668 679Right-handed alpha
Helix 26
AC8
A
680 682Right-handed 310
Helix 27
AC9
A
683 688Right-handed alpha
Helix 28
AD1
A
689 700Right-handed alpha
Helix 29
AD2
A
704 719Right-handed alpha
Helix 30
AD3
A
722 744Right-handed alpha
Helix 31
AD4
A
746 764Right-handed alpha
Helix 32
AD5
A
764 769Right-handed alpha
Helix 33
AD6
A
771 784Right-handed alpha
Helix 34
AD7
A
791 810Right-handed alpha
Helix 35
AD8
A
811 815Right-handed 310
Helix 36
AD9
A
816 829Right-handed alpha
Helix 37
AE1
A
833 852Right-handed alpha
Helix 38
AE2
A
855 861Right-handed alpha
Helix 39
AE3
A
863 875Right-handed alpha
Helix 40
AE4
A
877 892Right-handed alpha
Helix 41
AE5
A
895 904Right-handed alpha
Helix 42
AE6
A
929 937Right-handed alpha
Helix 43
AE7
A
942 960Right-handed alpha
Helix 44
AE8
A
961 963Right-handed 310
Helix 45
AE9
A
964 983Right-handed alpha
Helix 46
AF1
A
984 990Right-handed 310
Helix 47
AF2
A
993 1004Right-handed alpha
Helix 48
AF3
A
1005 1023Right-handed alpha
Helix 49
AF4
A
1027 1029Right-handed 310
Helix 50
AF5
A
1030 1042Right-handed alpha
Helix 51
AF6
A
1047 1064Right-handed alpha
Helix 52
AF7
A
1065 1069Right-handed 310
Helix 53
AF8
A
1070 1085Right-handed alpha
Helix 54
AF9
A
1087 1089Right-handed 310
Helix 55
AG1
A
1090 1104Right-handed alpha
Helix 56
AG2
A
1105 1108Right-handed 310
Helix 57
AG3
A
1110 1113Right-handed 310
Helix 58
AG4
A
1114 1124Right-handed alpha
Helix 59
AG5
A
1128 1146Right-handed alpha
Helix 60
AG6
A
1151 1166Right-handed alpha
Helix 61
AG7
A
1169 1185Right-handed alpha
Helix 62
AG8
A
1186 1190Right-handed 310
Helix 63
AG9
A
1191 1203Right-handed alpha
Helix 64
AH1
A
1206 1219Right-handed alpha
Helix 65
AH2
A
1228 1241Right-handed alpha
Helix 66
AH3
A
1264 1270Right-handed alpha
Helix 67
AH4
A
1276 1295Right-handed alpha
Helix 68
AH5
A
1297 1302Right-handed alpha
Helix 69
AH6
A
1303 1310Right-handed alpha
Helix 70
AH7
A
1310 1328Right-handed alpha
Helix 71
AH8
A
1330 1348Right-handed alpha
Helix 72
AH9
A
1350 1367Right-handed alpha
Helix 73
AI1
A
1379 1390Right-handed alpha
Helix 74
AI2
A
1392 1407Right-handed alpha
Helix 75
AI3
A
1409 1423Right-handed alpha
Helix 76
AI4
A
1425 1440Right-handed alpha
Helix 77
AI5
A
1446 1454Right-handed alpha
Helix 78
AI6
A
1455 1467Right-handed alpha
Helix 79
AI7
A
1473 1488Right-handed alpha
Helix 80
AI8
A
1489 1501Right-handed alpha
Helix 81
AI9
A
1505 1524Right-handed alpha
Helix 82
AJ1
A
1526 1534Right-handed alpha
Helix 83
AJ2
A
1540 1554Right-handed alpha
Helix 84
AJ3
A
1556 1580Right-handed alpha
Helix 85
AJ4
A
1582 1608Right-handed alpha
Helix 86
AJ5
A
1611 1625Right-handed alpha
Helix 87
AJ6
A
1629 1641Right-handed alpha
Helix 88
AJ7
A
1645 1648Right-handed 310
Helix 89
AJ8
A
1649 1664Right-handed alpha
Helix 90
AJ9
A
1665 1678Right-handed alpha
Helix 91
AK1
A
1680 1684Right-handed 310
Helix 92
AK2
A
1693 1707Right-handed alpha
Helix 93
AK3
A
1710 1731Right-handed alpha
Helix 94
AK4
A
1736 1763Right-handed alpha
Helix 95
AK5
A
1767 1783Right-handed alpha
Helix 96
AK6
A
1786 1814Right-handed alpha
Helix 97
AK7
A
1872 1876Right-handed alpha
Helix 98
AK8
A
1877 1880Right-handed 310
Helix 99
AK9
A
1881 1895Right-handed alpha
Helix 100
AL1
A
1899 1914Right-handed alpha
Helix 101
AL2
A
1916 1930Right-handed alpha
Helix 102
AL3
A
1932 1937Right-handed 310
Helix 103
AL4
A
1938 1946Right-handed alpha
Helix 104
AL5
A
1950 1968Right-handed alpha
Helix 105
AL6
A
1969 1981Right-handed alpha
Helix 106
AL7
A
1984 2021Right-handed alpha
Helix 107
AL8
A
2022 2042Right-handed alpha
Helix 108
AL9
A
2044 2061Right-handed alpha
Helix 109
AM1
A
2064 2092Right-handed alpha
Helix 110
AM2
A
2093 2115Right-handed alpha
Helix 111
AM3
A
2116 2118Right-handed 310
Helix 112
AM4
A
2123 2127Right-handed alpha
Helix 113
AM5
A
2127 2133Right-handed alpha
Helix 114
AM6
A
2192 2212Right-handed alpha
Helix 115
AM7
A
2212 2219Right-handed alpha
Helix 116
AM8
A
2246 2258Right-handed alpha
Helix 117
AM9
A
2262 2272Right-handed alpha
Helix 118
AN1
A
2279 2293Right-handed alpha
Helix 119
AN2
A
2297 2307Right-handed alpha
Helix 120
AN3
A
2309 2335Right-handed alpha
Helix 121
AN4
A
2340 2342Right-handed 310
Helix 122
AN5
A
2364 2368Right-handed 310
Helix 123
AN6
A
2380 2387Right-handed alpha
Helix 124
AN7
A
2394 2410Right-handed alpha
Helix 125
AN8
A
2410 2423Right-handed alpha
Helix 126
AN9
A
2428 2433Right-handed alpha
Helix 127
AO1
A
2493 2510Right-handed alpha
Helix 128
AO2
A
2520 2534Right-handed alpha
Helix 129
AO3
A
2534 2539Right-handed alpha
Helix 130
AO4
A
2542 2546Right-handed 310
Helix 131
AO5
C
33 47Right-handed alpha
Helix 132
AO6
C
52 71Right-handed alpha
Helix 133
AO7
C
73 78Right-handed alpha
Helix 134
AO8
C
80 92Right-handed alpha
Helix 135
AO9
C
96 111Right-handed alpha
Helix 136
AP1
C
113 123Right-handed alpha
Helix 137
AP2
C
125 135Right-handed alpha
Helix 138
AP3
C
139 157Right-handed alpha
Helix 139
AP4
C
163 175Right-handed alpha
Helix 140
AP5
C
183 198Right-handed alpha
Helix 141
AP6
C
198 206Right-handed alpha
Helix 142
AP7
C
207 217Right-handed alpha
Helix 143
AP8
C
220 237Right-handed alpha
Helix 144
AP9
C
237 242Right-handed alpha
Helix 145
AQ1
C
249 253Right-handed 310
Helix 146
AQ2
C
254 259Right-handed alpha
Helix 147
AQ3
C
272 293Right-handed alpha
Helix 148
AQ4
C
294 302Right-handed alpha
Helix 149
AQ5
C
307 318Right-handed alpha
Helix 150
AQ6
C
320 335Right-handed alpha
Helix 151
AQ7
C
345 353Right-handed alpha
Helix 152
AQ8
C
359 363Right-handed 310
Helix 153
AQ9
C
367 377Right-handed alpha
Helix 154
AR1
C
386 403Right-handed alpha
Helix 155
AR2
C
403 414Right-handed alpha
Helix 156
AR3
C
416 437Right-handed alpha
Helix 157
AR4
C
439 444Right-handed alpha
Helix 158
AR5
C
445 448Right-handed 310
Helix 159
AR6
C
449 457Right-handed alpha
Helix 160
AR7
C
462 486Right-handed alpha
Helix 161
AR8
C
491 509Right-handed alpha
Helix 162
AR9
C
524 535Right-handed alpha
Helix 163
AS1
C
547 557Right-handed alpha
Helix 164
AS2
C
567 582Right-handed alpha
Helix 165
AS3
C
583 586Right-handed 310
Helix 166
AS4
C
597 614Right-handed alpha
Helix 167
AS5
C
619 639Right-handed alpha
Helix 168
AS6
C
641 646Right-handed 310
Helix 169
AS7
C
647 652Right-handed alpha
Helix 170
AS8
C
654 657Right-handed 310
Helix 171
AS9
C
658 668Right-handed alpha
Helix 172
AT1
C
669 679Right-handed alpha
Helix 173
AT2
C
680 689Right-handed alpha
Helix 174
AT3
C
694 705Right-handed alpha
Helix 175
AT4
C
711 721Right-handed alpha
Helix 176
AT5
C
725 742Right-handed alpha
Helix 177
AT6
C
746 758Right-handed alpha
Helix 178
AT7
C
759 761Right-handed 310
Helix 179
AT8
C
763 778Right-handed alpha
Helix 180
AT9
C
780 791Right-handed alpha
Helix 181
AU1
C
794 797Right-handed 310
Helix 182
AU2
C
798 807Right-handed alpha
Helix 183
AU3
C
808 810Right-handed 310
Helix 184
AU4
C
811 821Right-handed alpha
Helix 185
AU5
C
822 834Right-handed alpha
Helix 186
AU6
C
834 852Right-handed alpha
Helix 187
AU7
C
881 887Right-handed alpha
Helix 188
AU8
C
889 899Right-handed alpha
Helix 189
AU9
C
900 911Right-handed alpha
Helix 190
AV1
C
916 934Right-handed alpha
Helix 191
AV2
C
936 947Right-handed alpha
Helix 192
AV3
C
948 959Right-handed alpha
Helix 193
AV4
C
961 976Right-handed alpha
Helix 194
AV5
C
978 987Right-handed alpha
Helix 195
AV6
C
1432 1436Right-handed 310
Helix 196
AV7
C
1479 1487Right-handed alpha
Helix 197
AV8
C
1523 1527Right-handed 310
Helix 198
AV9
C
1608 1625Right-handed alpha
Helix 199
AW1
C
1628 1643Right-handed alpha
Helix 200
AW2
C
1644 1648Right-handed 310
Helix 201
AW3
C
1649 1663Right-handed alpha
Helix 202
AW4
C
1666 1676Right-handed alpha
Helix 203
AW5
C
1682 1694Right-handed alpha
Helix 204
AW6
D
6 21Right-handed alpha
Helix 205
AW7
D
25 31Right-handed alpha
Helix 206
AW8
D
84 99Right-handed alpha
Helix 207
AW9
D
116 123Right-handed alpha
Helix 208
AX1
D
139 148Right-handed alpha
Back to top of page

There are 11 sheets in PDB entry 9ZBJ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
2120 2122first strand
Strand 2
A
2159 2162anti-parallel
Strand 3
A
2170 2176anti-parallel
Strand 4
A
2153 2156anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
2120 2122first strand
Strand 2
A
2159 2162anti-parallel
Strand 3
A
2170 2176anti-parallel
Strand 4
A
2181 2188anti-parallel
Strand 5
A
2234 2238anti-parallel
Strand 6
A
2227 2229anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
2243 2245first strand
Strand 2
A
2344 2347anti-parallel
Strand 3
A
2353 2355anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
34 39first strand
Strand 2
B
23 27anti-parallel
Strand 3
B
14 19anti-parallel
Strand 4
B
315 321anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
47 50first strand
Strand 2
B
56 60anti-parallel
Strand 3
B
65 69anti-parallel
Strand 4
B
79 81anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
88 93first strand
Strand 2
B
99 104anti-parallel
Strand 3
B
108 113anti-parallel
Strand 4
B
124 126anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
131 136first strand
Strand 2
B
142 147anti-parallel
Strand 3
B
152 156anti-parallel
Strand 4
B
162 165anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
173 178first strand
Strand 2
B
184 189anti-parallel
Strand 3
B
193 201anti-parallel
Strand 4
B
208 217anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
223 228first strand
Strand 2
B
234 239anti-parallel
Strand 3
B
243 248anti-parallel
Strand 4
B
254 259anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
273 277first strand
Strand 2
B
284 289anti-parallel
Strand 3
B
293 298anti-parallel
Strand 4
B
304 308anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
990 992first strand
Strand 2
C
1428 1430anti-parallel
Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il