Analysis of interatomic Contacts of Structural Units in PDB entry:
9ZCN


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9ZCN entry

There are 4 chains in PDB entry 9ZCN (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 107LYS 1094
B
 LYS 107LYS 1094
C
 LYS 107LYS 1094
D
 LYS 107LYS 1094
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are176 helices in PDB entry 9ZCN. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
120 125Right-handed alpha
Helix 2
AA2
A
149 167Right-handed alpha
Helix 3
AA3
A
177 191Right-handed alpha
Helix 4
AA4
A
265 279Right-handed alpha
Helix 5
AA5
A
300 314Right-handed alpha
Helix 6
AA6
A
326 335Right-handed alpha
Helix 7
AA7
A
343 353Right-handed alpha
Helix 8
AA8
A
353 358Right-handed alpha
Helix 9
AA9
A
361 377Right-handed alpha
Helix 10
AB1
A
378 382Right-handed 310
Helix 11
AB2
A
394 410Right-handed alpha
Helix 12
AB3
A
416 427Right-handed alpha
Helix 13
AB4
A
429 437Right-handed alpha
Helix 14
AB5
A
449 459Right-handed alpha
Helix 15
AB6
A
461 471Right-handed alpha
Helix 16
AB7
A
474 479Right-handed alpha
Helix 17
AB8
A
480 491Right-handed alpha
Helix 18
AB9
A
493 507Right-handed alpha
Helix 19
AC1
A
509 525Right-handed alpha
Helix 20
AC2
A
550 562Right-handed alpha
Helix 21
AC3
A
564 573Right-handed alpha
Helix 22
AC4
A
577 593Right-handed alpha
Helix 23
AC5
A
598 627Right-handed alpha
Helix 24
AC6
A
627 636Right-handed alpha
Helix 25
AC7
A
638 642Right-handed 310
Helix 26
AC8
A
646 654Right-handed alpha
Helix 27
AC9
A
656 661Right-handed alpha
Helix 28
AD1
A
662 675Right-handed alpha
Helix 29
AD2
A
682 692Right-handed alpha
Helix 30
AD3
A
693 697Right-handed 310
Helix 31
AD4
A
716 722Right-handed alpha
Helix 32
AD5
A
724 750Right-handed alpha
Helix 33
AD6
A
756 780Right-handed alpha
Helix 34
AD7
A
781 786Right-handed 310
Helix 35
AD8
A
787 808Right-handed alpha
Helix 36
AD9
A
811 843Right-handed alpha
Helix 37
AE1
A
846 879Right-handed alpha
Helix 38
AE2
A
885 900Right-handed alpha
Helix 39
AE3
A
946 969Right-handed alpha
Helix 40
AE4
A
979 998Right-handed alpha
Helix 41
AE5
A
1003 1007Right-handed 310
Helix 42
AE6
A
1041 1059Right-handed alpha
Helix 43
AE7
A
1063 1067Right-handed 310
Helix 44
AE8
A
1068 1094Right-handed alpha
Helix 45
AE9
B
120 125Right-handed alpha
Helix 46
AF1
B
149 167Right-handed alpha
Helix 47
AF2
B
177 191Right-handed alpha
Helix 48
AF3
B
265 279Right-handed alpha
Helix 49
AF4
B
300 314Right-handed alpha
Helix 50
AF5
B
326 335Right-handed alpha
Helix 51
AF6
B
343 353Right-handed alpha
Helix 52
AF7
B
353 358Right-handed alpha
Helix 53
AF8
B
361 377Right-handed alpha
Helix 54
AF9
B
378 382Right-handed 310
Helix 55
AG1
B
394 410Right-handed alpha
Helix 56
AG2
B
416 427Right-handed alpha
Helix 57
AG3
B
429 437Right-handed alpha
Helix 58
AG4
B
449 459Right-handed alpha
Helix 59
AG5
B
461 471Right-handed alpha
Helix 60
AG6
B
474 479Right-handed alpha
Helix 61
AG7
B
480 491Right-handed alpha
Helix 62
AG8
B
493 507Right-handed alpha
Helix 63
AG9
B
509 525Right-handed alpha
Helix 64
AH1
B
550 562Right-handed alpha
Helix 65
AH2
B
564 573Right-handed alpha
Helix 66
AH3
B
577 593Right-handed alpha
Helix 67
AH4
B
598 627Right-handed alpha
Helix 68
AH5
B
627 636Right-handed alpha
Helix 69
AH6
B
638 642Right-handed 310
Helix 70
AH7
B
646 654Right-handed alpha
Helix 71
AH8
B
656 661Right-handed alpha
Helix 72
AH9
B
662 675Right-handed alpha
Helix 73
AI1
B
682 692Right-handed alpha
Helix 74
AI2
B
693 697Right-handed 310
Helix 75
AI3
B
716 722Right-handed alpha
Helix 76
AI4
B
724 750Right-handed alpha
Helix 77
AI5
B
756 780Right-handed alpha
Helix 78
AI6
B
781 786Right-handed 310
Helix 79
AI7
B
787 808Right-handed alpha
Helix 80
AI8
B
811 843Right-handed alpha
Helix 81
AI9
B
846 879Right-handed alpha
Helix 82
AJ1
B
885 900Right-handed alpha
Helix 83
AJ2
B
945 969Right-handed alpha
Helix 84
AJ3
B
979 998Right-handed alpha
Helix 85
AJ4
B
1003 1007Right-handed 310
Helix 86
AJ5
B
1041 1059Right-handed alpha
Helix 87
AJ6
B
1063 1067Right-handed 310
Helix 88
AJ7
B
1068 1094Right-handed alpha
Helix 89
AJ8
C
120 125Right-handed alpha
Helix 90
AJ9
C
149 167Right-handed alpha
Helix 91
AK1
C
177 191Right-handed alpha
Helix 92
AK2
C
265 279Right-handed alpha
Helix 93
AK3
C
300 314Right-handed alpha
Helix 94
AK4
C
326 335Right-handed alpha
Helix 95
AK5
C
343 353Right-handed alpha
Helix 96
AK6
C
353 358Right-handed alpha
Helix 97
AK7
C
361 377Right-handed alpha
Helix 98
AK8
C
378 382Right-handed 310
Helix 99
AK9
C
394 410Right-handed alpha
Helix 100
AL1
C
416 427Right-handed alpha
Helix 101
AL2
C
429 437Right-handed alpha
Helix 102
AL3
C
449 459Right-handed alpha
Helix 103
AL4
C
461 471Right-handed alpha
Helix 104
AL5
C
474 479Right-handed alpha
Helix 105
AL6
C
480 491Right-handed alpha
Helix 106
AL7
C
493 507Right-handed alpha
Helix 107
AL8
C
509 525Right-handed alpha
Helix 108
AL9
C
550 562Right-handed alpha
Helix 109
AM1
C
564 573Right-handed alpha
Helix 110
AM2
C
577 593Right-handed alpha
Helix 111
AM3
C
598 627Right-handed alpha
Helix 112
AM4
C
627 636Right-handed alpha
Helix 113
AM5
C
638 642Right-handed 310
Helix 114
AM6
C
646 654Right-handed alpha
Helix 115
AM7
C
656 661Right-handed alpha
Helix 116
AM8
C
662 675Right-handed alpha
Helix 117
AM9
C
682 692Right-handed alpha
Helix 118
AN1
C
693 697Right-handed 310
Helix 119
AN2
C
716 722Right-handed alpha
Helix 120
AN3
C
724 750Right-handed alpha
Helix 121
AN4
C
756 780Right-handed alpha
Helix 122
AN5
C
781 786Right-handed 310
Helix 123
AN6
C
787 808Right-handed alpha
Helix 124
AN7
C
811 843Right-handed alpha
Helix 125
AN8
C
846 879Right-handed alpha
Helix 126
AN9
C
885 900Right-handed alpha
Helix 127
AO1
C
945 969Right-handed alpha
Helix 128
AO2
C
979 998Right-handed alpha
Helix 129
AO3
C
1003 1007Right-handed 310
Helix 130
AO4
C
1041 1059Right-handed alpha
Helix 131
AO5
C
1063 1067Right-handed 310
Helix 132
AO6
C
1068 1094Right-handed alpha
Helix 133
AO7
D
120 125Right-handed alpha
Helix 134
AO8
D
149 167Right-handed alpha
Helix 135
AO9
D
177 191Right-handed alpha
Helix 136
AP1
D
265 279Right-handed alpha
Helix 137
AP2
D
300 314Right-handed alpha
Helix 138
AP3
D
326 335Right-handed alpha
Helix 139
AP4
D
343 353Right-handed alpha
Helix 140
AP5
D
353 358Right-handed alpha
Helix 141
AP6
D
361 377Right-handed alpha
Helix 142
AP7
D
378 382Right-handed 310
Helix 143
AP8
D
394 410Right-handed alpha
Helix 144
AP9
D
416 427Right-handed alpha
Helix 145
AQ1
D
429 437Right-handed alpha
Helix 146
AQ2
D
449 459Right-handed alpha
Helix 147
AQ3
D
461 471Right-handed alpha
Helix 148
AQ4
D
474 479Right-handed alpha
Helix 149
AQ5
D
480 491Right-handed alpha
Helix 150
AQ6
D
493 507Right-handed alpha
Helix 151
AQ7
D
509 525Right-handed alpha
Helix 152
AQ8
D
550 562Right-handed alpha
Helix 153
AQ9
D
564 573Right-handed alpha
Helix 154
AR1
D
577 593Right-handed alpha
Helix 155
AR2
D
598 627Right-handed alpha
Helix 156
AR3
D
627 636Right-handed alpha
Helix 157
AR4
D
638 642Right-handed 310
Helix 158
AR5
D
646 654Right-handed alpha
Helix 159
AR6
D
656 661Right-handed alpha
Helix 160
AR7
D
662 675Right-handed alpha
Helix 161
AR8
D
682 692Right-handed alpha
Helix 162
AR9
D
693 697Right-handed 310
Helix 163
AS1
D
716 722Right-handed alpha
Helix 164
AS2
D
724 750Right-handed alpha
Helix 165
AS3
D
756 780Right-handed alpha
Helix 166
AS4
D
781 786Right-handed 310
Helix 167
AS5
D
787 808Right-handed alpha
Helix 168
AS6
D
811 843Right-handed alpha
Helix 169
AS7
D
846 879Right-handed alpha
Helix 170
AS8
D
885 900Right-handed alpha
Helix 171
AS9
D
946 969Right-handed alpha
Helix 172
AT1
D
979 998Right-handed alpha
Helix 173
AT2
D
1003 1007Right-handed 310
Helix 174
AT3
D
1041 1059Right-handed alpha
Helix 175
AT4
D
1063 1067Right-handed 310
Helix 176
AT5
D
1068 1094Right-handed alpha
Back to top of page

There are 4 sheets in PDB entry 9ZCN. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
250 252first strand
Strand 2
A
201 205parallel
Strand 3
A
169 172parallel
Strand 4
A
135 138parallel
Strand 5
A
292 295parallel
Strand 6
A
317 321parallel
Strand 7
A
384 385parallel
Back to list of sheets
Back to top of page

There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
250 252first strand
Strand 2
B
201 205parallel
Strand 3
B
169 172parallel
Strand 4
B
135 138parallel
Strand 5
B
292 295parallel
Strand 6
B
317 321parallel
Strand 7
B
384 385parallel
Back to list of sheets
Back to top of page

There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
250 252first strand
Strand 2
C
201 205parallel
Strand 3
C
169 172parallel
Strand 4
C
135 138parallel
Strand 5
C
292 295parallel
Strand 6
C
317 321parallel
Strand 7
C
384 385parallel
Back to list of sheets
Back to top of page

There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
250 252first strand
Strand 2
D
201 205parallel
Strand 3
D
169 172parallel
Strand 4
D
135 138parallel
Strand 5
D
292 295parallel
Strand 6
D
317 321parallel
Strand 7
D
384 385parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il