Analysis of interatomic Contacts of Structural Units in PDB entry:
9ZCP


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9ZCP entry

There are 4 chains in PDB entry 9ZCP (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 107LYS 1094
B
 LYS 107LYS 1094
C
 LYS 107LYS 1094
D
 LYS 107LYS 1094
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are172 helices in PDB entry 9ZCP. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
120 125Right-handed alpha
Helix 2
AA2
A
149 167Right-handed alpha
Helix 3
AA3
A
178 191Right-handed alpha
Helix 4
AA4
A
265 279Right-handed alpha
Helix 5
AA5
A
300 314Right-handed alpha
Helix 6
AA6
A
325 335Right-handed alpha
Helix 7
AA7
A
341 353Right-handed alpha
Helix 8
AA8
A
353 359Right-handed alpha
Helix 9
AA9
A
361 377Right-handed alpha
Helix 10
AB1
A
393 409Right-handed alpha
Helix 11
AB2
A
416 427Right-handed alpha
Helix 12
AB3
A
429 437Right-handed alpha
Helix 13
AB4
A
448 459Right-handed alpha
Helix 14
AB5
A
461 471Right-handed alpha
Helix 15
AB6
A
474 479Right-handed alpha
Helix 16
AB7
A
480 491Right-handed alpha
Helix 17
AB8
A
493 507Right-handed alpha
Helix 18
AB9
A
509 524Right-handed alpha
Helix 19
AC1
A
550 562Right-handed alpha
Helix 20
AC2
A
564 573Right-handed alpha
Helix 21
AC3
A
577 593Right-handed alpha
Helix 22
AC4
A
598 627Right-handed alpha
Helix 23
AC5
A
627 636Right-handed alpha
Helix 24
AC6
A
646 654Right-handed alpha
Helix 25
AC7
A
656 661Right-handed alpha
Helix 26
AC8
A
662 675Right-handed alpha
Helix 27
AC9
A
682 692Right-handed alpha
Helix 28
AD1
A
693 697Right-handed 310
Helix 29
AD2
A
716 723Right-handed alpha
Helix 30
AD3
A
724 750Right-handed alpha
Helix 31
AD4
A
756 781Right-handed alpha
Helix 32
AD5
A
782 786Right-handed 310
Helix 33
AD6
A
787 809Right-handed alpha
Helix 34
AD7
A
811 843Right-handed alpha
Helix 35
AD8
A
846 879Right-handed alpha
Helix 36
AD9
A
887 895Right-handed alpha
Helix 37
AE1
A
895 900Right-handed alpha
Helix 38
AE2
A
945 969Right-handed alpha
Helix 39
AE3
A
982 999Right-handed alpha
Helix 40
AE4
A
1003 1008Right-handed 310
Helix 41
AE5
A
1041 1060Right-handed alpha
Helix 42
AE6
A
1062 1067Right-handed alpha
Helix 43
AE7
A
1069 1094Right-handed alpha
Helix 44
AE8
B
120 125Right-handed alpha
Helix 45
AE9
B
149 167Right-handed alpha
Helix 46
AF1
B
178 191Right-handed alpha
Helix 47
AF2
B
265 279Right-handed alpha
Helix 48
AF3
B
300 314Right-handed alpha
Helix 49
AF4
B
325 335Right-handed alpha
Helix 50
AF5
B
341 353Right-handed alpha
Helix 51
AF6
B
353 359Right-handed alpha
Helix 52
AF7
B
361 377Right-handed alpha
Helix 53
AF8
B
393 409Right-handed alpha
Helix 54
AF9
B
416 427Right-handed alpha
Helix 55
AG1
B
429 437Right-handed alpha
Helix 56
AG2
B
448 459Right-handed alpha
Helix 57
AG3
B
461 471Right-handed alpha
Helix 58
AG4
B
474 479Right-handed alpha
Helix 59
AG5
B
480 491Right-handed alpha
Helix 60
AG6
B
493 507Right-handed alpha
Helix 61
AG7
B
509 524Right-handed alpha
Helix 62
AG8
B
550 562Right-handed alpha
Helix 63
AG9
B
564 573Right-handed alpha
Helix 64
AH1
B
577 593Right-handed alpha
Helix 65
AH2
B
598 627Right-handed alpha
Helix 66
AH3
B
627 636Right-handed alpha
Helix 67
AH4
B
646 654Right-handed alpha
Helix 68
AH5
B
656 661Right-handed alpha
Helix 69
AH6
B
662 675Right-handed alpha
Helix 70
AH7
B
682 692Right-handed alpha
Helix 71
AH8
B
693 697Right-handed 310
Helix 72
AH9
B
716 723Right-handed alpha
Helix 73
AI1
B
724 750Right-handed alpha
Helix 74
AI2
B
756 781Right-handed alpha
Helix 75
AI3
B
782 786Right-handed 310
Helix 76
AI4
B
787 809Right-handed alpha
Helix 77
AI5
B
811 843Right-handed alpha
Helix 78
AI6
B
846 879Right-handed alpha
Helix 79
AI7
B
887 895Right-handed alpha
Helix 80
AI8
B
895 900Right-handed alpha
Helix 81
AI9
B
945 969Right-handed alpha
Helix 82
AJ1
B
982 999Right-handed alpha
Helix 83
AJ2
B
1003 1008Right-handed 310
Helix 84
AJ3
B
1041 1060Right-handed alpha
Helix 85
AJ4
B
1062 1067Right-handed alpha
Helix 86
AJ5
B
1069 1094Right-handed alpha
Helix 87
AJ6
C
120 125Right-handed alpha
Helix 88
AJ7
C
149 167Right-handed alpha
Helix 89
AJ8
C
178 191Right-handed alpha
Helix 90
AJ9
C
265 279Right-handed alpha
Helix 91
AK1
C
300 314Right-handed alpha
Helix 92
AK2
C
325 335Right-handed alpha
Helix 93
AK3
C
341 353Right-handed alpha
Helix 94
AK4
C
353 359Right-handed alpha
Helix 95
AK5
C
361 377Right-handed alpha
Helix 96
AK6
C
393 409Right-handed alpha
Helix 97
AK7
C
416 427Right-handed alpha
Helix 98
AK8
C
429 437Right-handed alpha
Helix 99
AK9
C
448 459Right-handed alpha
Helix 100
AL1
C
461 471Right-handed alpha
Helix 101
AL2
C
474 479Right-handed alpha
Helix 102
AL3
C
480 491Right-handed alpha
Helix 103
AL4
C
493 507Right-handed alpha
Helix 104
AL5
C
509 524Right-handed alpha
Helix 105
AL6
C
550 562Right-handed alpha
Helix 106
AL7
C
564 573Right-handed alpha
Helix 107
AL8
C
577 593Right-handed alpha
Helix 108
AL9
C
598 627Right-handed alpha
Helix 109
AM1
C
627 636Right-handed alpha
Helix 110
AM2
C
646 654Right-handed alpha
Helix 111
AM3
C
656 661Right-handed alpha
Helix 112
AM4
C
662 675Right-handed alpha
Helix 113
AM5
C
682 692Right-handed alpha
Helix 114
AM6
C
693 697Right-handed 310
Helix 115
AM7
C
716 723Right-handed alpha
Helix 116
AM8
C
724 750Right-handed alpha
Helix 117
AM9
C
756 781Right-handed alpha
Helix 118
AN1
C
782 786Right-handed 310
Helix 119
AN2
C
787 809Right-handed alpha
Helix 120
AN3
C
811 843Right-handed alpha
Helix 121
AN4
C
846 879Right-handed alpha
Helix 122
AN5
C
887 895Right-handed alpha
Helix 123
AN6
C
895 900Right-handed alpha
Helix 124
AN7
C
945 969Right-handed alpha
Helix 125
AN8
C
982 999Right-handed alpha
Helix 126
AN9
C
1003 1008Right-handed 310
Helix 127
AO1
C
1041 1060Right-handed alpha
Helix 128
AO2
C
1062 1067Right-handed alpha
Helix 129
AO3
C
1069 1094Right-handed alpha
Helix 130
AO4
D
120 125Right-handed alpha
Helix 131
AO5
D
149 167Right-handed alpha
Helix 132
AO6
D
178 191Right-handed alpha
Helix 133
AO7
D
265 279Right-handed alpha
Helix 134
AO8
D
300 314Right-handed alpha
Helix 135
AO9
D
325 335Right-handed alpha
Helix 136
AP1
D
341 353Right-handed alpha
Helix 137
AP2
D
353 359Right-handed alpha
Helix 138
AP3
D
361 377Right-handed alpha
Helix 139
AP4
D
393 409Right-handed alpha
Helix 140
AP5
D
416 427Right-handed alpha
Helix 141
AP6
D
429 437Right-handed alpha
Helix 142
AP7
D
448 459Right-handed alpha
Helix 143
AP8
D
461 471Right-handed alpha
Helix 144
AP9
D
474 479Right-handed alpha
Helix 145
AQ1
D
480 491Right-handed alpha
Helix 146
AQ2
D
493 507Right-handed alpha
Helix 147
AQ3
D
509 524Right-handed alpha
Helix 148
AQ4
D
550 562Right-handed alpha
Helix 149
AQ5
D
564 573Right-handed alpha
Helix 150
AQ6
D
577 593Right-handed alpha
Helix 151
AQ7
D
598 627Right-handed alpha
Helix 152
AQ8
D
627 636Right-handed alpha
Helix 153
AQ9
D
646 654Right-handed alpha
Helix 154
AR1
D
656 661Right-handed alpha
Helix 155
AR2
D
662 675Right-handed alpha
Helix 156
AR3
D
682 692Right-handed alpha
Helix 157
AR4
D
693 697Right-handed 310
Helix 158
AR5
D
716 723Right-handed alpha
Helix 159
AR6
D
724 750Right-handed alpha
Helix 160
AR7
D
756 781Right-handed alpha
Helix 161
AR8
D
782 786Right-handed 310
Helix 162
AR9
D
787 809Right-handed alpha
Helix 163
AS1
D
811 843Right-handed alpha
Helix 164
AS2
D
846 879Right-handed alpha
Helix 165
AS3
D
887 895Right-handed alpha
Helix 166
AS4
D
895 900Right-handed alpha
Helix 167
AS5
D
945 969Right-handed alpha
Helix 168
AS6
D
982 999Right-handed alpha
Helix 169
AS7
D
1003 1008Right-handed 310
Helix 170
AS8
D
1041 1060Right-handed alpha
Helix 171
AS9
D
1062 1067Right-handed alpha
Helix 172
AT1
D
1069 1094Right-handed alpha
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There are 4 sheets in PDB entry 9ZCP. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
108 109first strand
Strand 2
A
250 252parallel
Strand 3
A
201 205parallel
Strand 4
A
168 173parallel
Strand 5
A
134 138parallel
Strand 6
A
292 295parallel
Strand 7
A
317 321parallel
Strand 8
A
382 385parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
108 109first strand
Strand 2
B
250 252parallel
Strand 3
B
201 205parallel
Strand 4
B
168 173parallel
Strand 5
B
134 138parallel
Strand 6
B
292 295parallel
Strand 7
B
317 321parallel
Strand 8
B
382 385parallel
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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
108 109first strand
Strand 2
C
250 252parallel
Strand 3
C
201 205parallel
Strand 4
C
168 173parallel
Strand 5
C
134 138parallel
Strand 6
C
292 295parallel
Strand 7
C
317 321parallel
Strand 8
C
382 385parallel
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There are 8 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
108 109first strand
Strand 2
D
250 252parallel
Strand 3
D
201 205parallel
Strand 4
D
168 173parallel
Strand 5
D
134 138parallel
Strand 6
D
292 295parallel
Strand 7
D
317 321parallel
Strand 8
D
382 385parallel
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